KEGG   Trifolium pratense (red clover): 123902203
Entry
123902203         CDS       T08949                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03030  DNA replication
tpra03410  Base excision repair
tpra03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123902203
   03410 Base excision repair
    123902203
   03450 Non-homologous end-joining
    123902203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpra03032]
    123902203
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123902203
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpra04147]
    123902203
DNA replication proteins [BR:tpra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123902203
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123902203
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123902203
Exosome [BR:tpra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123902203
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF7645 SAP DUF3231 PM2_P3
Other DBs
NCBI-GeneID: 123902203
NCBI-ProteinID: XP_045807828
LinkDB
Position
LG1:complement(26252551..26262068)
AA seq 416 aa
MGIKGLTKLLADNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFSRTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLSEAIETDN
KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASED
MDSLTFGAPKFLRHLMDPSSKKVPVMEFDIAKILEELNLTMDQFIDLCILSGCDYCDNIR
GIGGLTALKLIRQHGSIETILENLSKERYQIPDDWPYQEARRLFKEPEVSTDDEVLNLKW
SPPDEEGLITFLVNENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKE
SKCMLRSFKPAIDHKMSSLRISNQSRSMGFGKLSMPIYNMGSKLSVSLSRGVCFGS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgggtattaagggtttaacgaagcttttagctgacaatgcccccaaatccatgaaggag
aacaaattcgagagctattttggccgaaagatcgctgttgatgccagcatgagcatttac
cagtttcttattgttgtgggaagaagtggaactgaaatgctgactaatgaagctggtgaa
gttactagtcatttgcaaggaatgttttcacggacaatcagacttctagaagcggggatg
aagccagtatatgtttttgatgggaagccaccggagatgaagaatcaagagctgaaaaaa
cggctttcaaagagagctgaggctaccgcgggtttgtcagaagctatagagactgacaat
aaggaagatattgaaaaattcagtaaacggacagtgaaggtgacaaagcaacataatgat
gactgcaaaagacttttaagactcatgggagtccccgttgttgaggcgccctccgaagca
gaggctcagtgtgctgctctttgcaaagctggaaaggtgtatgctgtggcttctgaagac
atggactccttaacgtttggagctcctaaattcctccgccatctaatggatcctagctca
aagaaggttccagtaatggaatttgacattgcaaagattttggaggagctaaatctgacc
atggaccaatttattgacttgtgtattctttctgggtgtgattactgtgacaacattcga
ggtattggggggctaacagctttgaagctcatacgccaacatggctctatcgaaactata
ctggaaaacctaagcaaagagaggtaccagataccagatgattggccgtatcaggaggct
cgacgactttttaaagaaccagaggtctcaactgatgatgaagtacttaatcttaagtgg
tctcctccagatgaagaagggttaataacttttctagtaaatgagaatgggttcaacagt
gacagggtgacaaaggcaatagagaaaattaaagcggcaaagaacaagtcatcacaaggc
cgattggaatcattttttaagccaacagcaaatccatctgtacctatcaaacggaaggaa
agcaaatgcatgcttagatcattcaaaccagcaattgatcataagatgtcctctctgcga
atttctaaccagtcaaggtccatgggttttggcaagttgagcatgccgatctataatatg
ggttccaagctttcagtatcattgtctagaggtgtatgctttggttcctga

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