Trifolium pratense (red clover): 123902225
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Entry
123902225 CDS
T08949
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123902225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123902225
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
123902225
Prokaryotic type
Archaeal type
TFB
123902225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
zf_Tbcl_2
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
123902225
NCBI-ProteinID:
XP_045807848
LinkDB
All DBs
Position
LG1:26504013..26509020
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AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRETEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESNDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGSSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMAERLA
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEF
DIRRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcgttttgcagcgactgcaagagagagactgaagtcgttttcgatcactca
gcaggcgacacagtctgctccgagtgcggactcgtcctcgaatctcactccatcgatgag
acttccgagtggcgtaccttcgcaaacgagtccaacgataacgatcccgttcgtgtcggt
ggtccatctaatcctctcttaaccgacggcggtctctccaccgtcatcgccaaacctaac
ggatcttccggcgagttcctctcttcttctctcggacgttggcagaatcgtggctctaac
cctgatcgtggactcatccttgctttcaaaaccatcgctactatggctgaaaggttggca
cttgttgcaaccatcaaggatcgagcaaatgagatatataagagggttgaagaccaaaag
tctagtagaggaagaaatcaagatgctttgttggctgcttgtctctacatcgcttgccga
caagaagacaaaccgcgaactgtaaaggaaatctgctccgttgccaatggggccacaaag
aaggaaattggccgagcaaaagagtacatagtgaaacaacttggtttggagaagggtcag
tctgtggagatgggcacaatacatgcaggggactttatgaggcgattctgttccaatctt
aatatgaaccatcaagctgttaaagctgctcaggaagctgtgaagaaagcagaagaattt
gatataaggaggagtcctatatcgattgctgctgcaattatatacatcataactcagctt
tctgatgataaaaaacctctcaaagatatatcaattgccacaggagtcgcagaaggaact
attaggaactcctacaaggatctttatccccatgtttcaaaaataataccaacttggtat
gcaaaggaggaggatttgaagaatctttctagcccttga
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