Trifolium pratense (red clover): 123902292
Help
Entry
123902292 CDS
T08949
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123902292
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
123902292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
123902292
NCBI-ProteinID:
XP_045807939
LinkDB
All DBs
Position
LG1:complement(12958754..12961118)
Genome browser
AA seq
580 aa
AA seq
DB search
MSGGEAQKGRRVAIIGVSSLLLVAMVVAVTVGNQNGMEDDIENNRKNHVASTVRAVQTIC
HPAEYKKECEDALTSEAEANNVTDPKELIKIAFNVTIKKIGEKLVETDLMDEVEKDPRSK
DALDTCKQLMDLSIGEFTKSLDGMGQFHLQDLDKFLMNVKVWLNGAVTYMDTCVDGFENT
TTDAGQKMKELLTSSMHMSSNALAIISDFADTVSDWNVTKFLGRRLLHDSETPSWVDHRR
LLDAKTNSFKHKPDVTVALDGSGDVKSINEALTKVPEKSKKPFIIYIKAGVYAEYVEVNK
HMTNVVFVGEGGKKSVITGNKNFIDGINTYRTATVAIQGDHFTAINMGFENSAGPHKHQA
VALRVQGDKSIFFNCSMDGYQDTLYVHTMRQFYRDCTISGTIDFVFGNALAVFQNCKFVV
RKPMSNQQCIVTAQGRKEKFQPSAIIIQGGSIVSDPEFYPVRFDNKAYLARPWKNFSRTI
IMDTFIDDLIQPDGYLPWQTEFGFAGMDTCFYVEYHNYGPGSDKSKRVKWPGIWNLNSKA
AHWFAPSKFFHGGDWIEETGIPFFSGIPEHKKHNKTVHKW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggagaggcacagaaaggaagaagagtcgccataattggcgtatcctccttg
ttattggtggctatggttgttgctgtcactgttggtaaccaaaatggtatggaagatgat
atagagaacaataggaaaaatcatgttgcttccacagtgagagcagtacaaaccatttgt
catcccgccgaatacaagaaggaatgtgaggatgccctcacatcagaagcggaggccaac
aatgtcaccgacccaaaagaacttattaaaatagcattcaatgttaccataaaaaaaatt
ggtgaaaaactcgtagaaacggatctaatggatgaggttgagaaggatcctagatccaag
gatgcacttgatacttgcaagcaacttatggatctctccattggtgaattcacaaagtca
ctagatggaatgggccagtttcatcttcaagatcttgacaaattcctcatgaatgtgaag
gtttggctcaatggtgcagttacatacatggatacatgtgtggatgggttcgagaacact
accaccgatgctggtcagaagatgaaggagttattaacatcaagcatgcacatgagtagc
aatgcccttgccatcatttccgattttgctgatactgtctctgattggaatgtcaccaaa
tttctcggacgtcgtctccttcatgattccgagactccttcttgggttgatcatcgcaga
ctccttgatgcaaagacaaactcattcaaacacaagcctgatgttactgtagctttagat
ggtagtggtgatgttaagagcattaatgaggcattgacaaaggttcccgagaagagcaaa
aaaccatttataatctacattaaggcgggtgtttatgcagagtatgttgaagttaacaag
catatgaccaatgtcgtgtttgttggtgagggtggtaagaagtcagtaatcaccggcaac
aaaaactttatcgatggaattaacacctacagaaccgccactgttgctattcaaggagat
cactttactgccatcaacatgggttttgaaaactctgccggtccacacaaacatcaagca
gtggcactaagggttcaaggagataagtccatcttcttcaattgctcaatggatggttat
caagacacactttatgtacacaccatgcgtcaattctaccgggattgcaccatttcaggt
accatcgacttcgtctttggtaatgctttagccgttttccaaaactgcaaattcgtggtc
cgtaagcctatgtcaaaccaacaatgcattgtgaccgcacaaggaaggaaagaaaaattc
caaccatcagcaataatcatccaaggaggctccattgtttccgaccctgagttctacccg
gtcaggtttgacaacaaggcctacttagcccgtccatggaagaacttctctaggactatc
attatggataccttcatcgatgatttgattcaacccgatggttatttgccatggcaaaca
gaatttggtttcgccggcatggacacttgcttctacgttgagtaccataactatggccct
ggttcagacaaatcaaagcgtgtgaaatggcctggaatttggaaccttaattccaaggcg
gcacattggtttgcaccatccaagttcttccatggtggtgactggatcgaggaaaccgga
attcctttcttttccggtattcctgaacacaaaaagcacaacaagacagtgcataaatgg
tga
DBGET
integrated database retrieval system
