Trifolium pratense (red clover): 123902386
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Entry
123902386 CDS
T08949
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
tpra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123902386
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123902386
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123902386
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123902386
03036 Chromosome and associated proteins [BR:
tpra03036
]
123902386
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123902386
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123902386
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123902386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
123902386
NCBI-ProteinID:
XP_045808050
LinkDB
All DBs
Position
LG1:17390949..17402169
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AA seq
539 aa
AA seq
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MDVEETGKLESLDPDMLQLQEVSPFSLKSSPYVAEELFSQWLSLPDTSRLVKSLLADAKA
GVPFSALENSTNSNALSINPLPSLFPAGSTPPLSPRSSPGSPRTMKQRTSPSSLGSPLKL
VRDPVREIIPQFYFKNGRPPPNEMKEHFLFQVDNRFHGHLDGLQLLEFKSFTKEICKLPS
FFSTALFRKIDVSFTGTITRDQFIDYWIRSNMLAMDLPTQIYTILKQPHRTYLVQDDFKP
ILRELLSSHPGLEFLHSTPEFQERYAETVIHRIFYYMNRSGNGRLTLRELKRGNLIDAML
HVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHSLTYRIVDRIF
SQVPRKFSSKVEGKMNYEDFVHFILAEEDKSSEPSLEYWFRCIDLDGNGVLTSNEMLFFY
EEQLHRMECMAQEPVLFEDILCQLVDMIGPENDGYITLRDVKSSKLSGNVFNILFNLNKF
IAFETRDPFLIRQEREDPNMTEWDRFAHREYIRLSMEEDGEDMSNASGDVWEESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaggaaactggaaagttggaatctttggacccagatatgttgcagcttcaa
gaggtttctcctttttctctcaaatcgagtccttatgttgctgaagagcttttctcgcag
tggctttcacttccagatacttctcgtttggttaagtcactgcttgctgacgcaaaggct
ggagttcccttcagtgcacttgagaactcaacaaattcaaatgctctttcaatcaacccg
ttaccttccttatttccggctgggagtacaccaccactttcaccacgcagctcacctggt
tccccacggaccatgaaacagagaactagcccttcttcattaggttctccactaaaatta
gtccgtgaccctgtaagggagatcattcctcagttctacttcaaaaatggtcgtccacct
ccaaatgaaatgaaagagcatttcctgtttcaagttgataatcgatttcacggtcatttg
gatggtttgcaattacttgagttcaagtcttttacgaaagagatatgcaaacttccctcg
tttttctctactgctcttttcagaaagattgatgtcagttttacaggaaccataacaagg
gatcaatttatcgactattggattcgaagcaatatgttagctatggatttaccgacacaa
atatataccatactgaagcagccacatcgaacataccttgtacaggatgatttcaaacct
atcttgagggaactattgtcttctcatcctggattggagtttttgcacagcacgcctgaa
tttcaagaaagatatgctgagactgtcatacatagaatattttactacatgaatagatca
ggaaatggccgacttactctgagggagttgaagcgtgggaacctaattgatgccatgttg
catgtagatgaagaagaggatattaataaagttctgaggtacttctcatatgagcatttt
tatgtcatttactgcaaattttgggagctcgacacagatcacgactttttcattgacaga
gagaaccttattaaatatgggaaccattctcttacatatcggatcgttgatagaattttt
tcccaggttccgcgaaaatttagcagtaaagttgaagggaagatgaactatgaagatttt
gttcattttatacttgcagaggaagataagtcatctgaacctagtctggaatactggttc
agatgcattgatttggatggaaatggagtgttgacatcaaatgaaatgctgttcttttac
gaggagcagttgcatcgaatggaatgtatggcccaagaaccagtgcttttcgaagatata
ttatgtcagcttgttgatatgattggaccagagaatgatggatatatcacattacgtgat
gtcaaaagcagcaaactttctggaaatgttttcaacattcttttcaatctcaacaagttc
atcgcttttgaaactcgtgatccgtttctcatacgtcaggaacgcgaggatccaaatatg
acagagtgggaccgttttgcacacagagaatatattaggctttctatggaagaagatggt
gaagacatgtcaaatgccagtggagatgtctgggaagaatcacttgaggcccctttctga
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