Trifolium pratense (red clover): 123902400
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Entry
123902400 CDS
T08949
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00906
Carotenoid biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
123902400
Enzymes [BR:
tpra01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
123902400
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
GDI
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
123902400
NCBI-ProteinID:
XP_045808071
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Position
LG1:52228092..52232935
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AA seq
598 aa
AA seq
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MLNFPSLSISNHTFSYNPINYNHIPPLKFQSLALCSYGRTKFPSGSCSYGLRRKRVLVKG
VLKVKEEGVESGKRVDFGEGFDAIVIGSGIGGLVAGTQLAVKGARVLVLEKYVIPGGSSG
FYNRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMEVIPDPTTVHFHLPNHLSVRV
HREYDKFIEELTSYFPHEKDGILKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPLE
CLTLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGG
INYPLGGVGGIAKSLAKGLIDQGSQILYKANVTSIITEQGKAVGVRLSDGREFFAKTIIS
NATRWDTFGKLIKQETLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPLDTDCHHFVLENN
WTDLEEPYGSIFLSIPTILDSSLAPEGRHILHIFTTSSMDDWKGLSRIDYEAKKQVVADE
IISRLEKKLFPGLRSAIDFIEVGTPKTHRRYLARDEGTYGPMPRSIPKGLLGMPFNTTSI
DGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAMLLRLLGWFRTLA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatttcccttcactctccatctccaaccacactttttcctacaaccccatcaac
tacaatcacatcccacctttaaagtttcaatctttagctttatgtagctatggaagaact
aaatttccatctgggtcatgctcatatggacttagaagaaaaagggtgttggttaaaggg
gttttgaaagtaaaggaagaaggtgtggaaagtggaaaaagagtggattttggagaaggg
tttgatgcaattgttattgggtctgggattggtggattagttgctgggacacagttggca
gtaaaaggtgctagagttttggttttggagaagtatgttattcctggtggaagctctggt
ttttataatagggatggttatacttttgatgttggttcttctgtcatgtttggtttcagt
gataagggtaatctcaatttgataacacaagcattggaagcagttggttgtcggatggag
gtgataccagatccaacaactgttcatttccatctaccgaaccacctctctgttcgagtg
cacagagagtatgacaaattcattgaagaacttacgagttattttccccatgaaaaggac
ggtatcctcaaattctatggtgaatgctggaagattttcaatgccctgaattcattggag
ttgaagtcgctagaggagccactctacctttttggacagttttttcagaagccgcttgaa
tgcttgacattagcctattatttgccgcaaaatgctggagccatagcccggaagtatatt
caggatccgcagttgttgtctttcatagacgcagagtgttttatagtgagcacggtcaac
gcgttgcagactccaatgatcaatgctagcatggttctgtgtgacagacactttggcggt
attaactaccctcttggcggtgttggtgggattgcaaagtccttggcaaaaggtctcatt
gatcagggtagtcagatactttacaaggcaaatgtcacaagtattatcaccgagcagggc
aaagccgtaggagtgaggctttcagatggcagagagttcttcgctaagaccataatttca
aatgctaccagatgggacacattcggaaagttaataaaacaagagacacttccgaaagag
gaagagaacttccagaaagtttatgttaaagctccatcttttctgtcaatccacatgggg
gttaaagcggaggttttacctctagatacagattgtcaccattttgtgcttgagaacaac
tggaccgatttggaggagccatatggaagtatctttttgagtataccgactattcttgat
tcatcgttagctcctgaaggtcgtcacatccttcatatatttacaacttcttccatggac
gactggaagggtctctcaagaatcgattatgaagcaaagaagcaggtggtagcagatgaa
atcataagcagattagagaagaaattgtttcctggtcttagatcagccatcgattttata
gaggtagggacaccaaagacacatcgacgatacctagcccgcgacgagggtacttatgga
ccaatgccacgtagcattccaaagggattattaggaatgccatttaatacaacaagcata
gatggtctttactgtgttggagacagttgcttccctggacaaggtgttattgctgtagct
ttctctggagttatgtgcgctcatcgagtagctgcggatattgggttggagaaaaagtca
cctgttttagatgccatgctgcttcggttgcttggttggttcagaacactggcataa
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