Trifolium pratense (red clover): 123902418 Help Entry 123902418         CDS       T08949                                  Name (RefSeq) transcription factor bHLH140   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism tpra  Trifolium pratense (red clover) Pathway tpra03410   Base excision repair Brite KEGG Orthology (KO) [BR:tpra00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     123902418  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tpra03400]     123902418 Enzymes [BR:tpra01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      123902418     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      123902418     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      123902418 DNA repair and recombination proteins [BR:tpra03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      123902418   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      123902418 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C AAA_33 Macro zf-C2HE HIT AAA_18 AAA_17 Zeta_toxin KTI12 AAA_16 AAA AAA_29 AAA_22 Viral_helicase1 nSTAND3 CPT AAA_25 Motif Other DBs NCBI-GeneID:  123902418 NCBI-ProteinID:  XP_045808105 LinkDB All DBs Position LG1:complement(42763972..42768441) Genome browser AA seq 748 aa AA seqDB search MDLDNKDAKPILVILVGAPGSGKSTFCDEVMRSSSRPWLRVCQDTIGNGKAGTKAQCLSS AARALKDGKSVFIDRCNLNREQRSDFLKLRGETQIDMHAVVLDLPAKLCISRSVKRSGHE GNLQGGKAAAVVNRMLQSKELPKLSEGFNRITFCQSESNVKDAIDTYQKLGPLENLSHGC FGQKNPDSKIQSSIMKFLKKAEVPVDTASKENVIGDSTSQTPGKNDSLCKDKEKITSPHD NSKLGSKETKGQADKSAGSYHNQISLDDPPTLAFPSISTADFQFNHDKAADIIVEKVAEY SKKMGNARLVLVDLTHKSKILSLVKSKVAEKNIDTQKFFTHVGDITRLHSTGGLRCNVIA NAANWRLKPGGGGVNASIFDAAGPELESATKEKAKTLSPGNAVVVPLPSSSPLFTREGVT HVIHVLGPNMNPQRPNCLNNDYEKGCKVLQDAYASLFEGFASIVRNQMQHNENLGKKTLE LQDQSEKCSINHSTNSDQKSKRDADHGPEKSKKYKGTHDGFELTFTGSKDEKVDSEHRRT DGSTRKAWGSWAQALHQIAMHPEKHKDHLLEISEDIVVLNDMYPKAQKHVLVLSRSRGLD CLSDVQEEHLSVLKRMHAVGLKWAEKFLSENASLVFRLGYHSAPSMRQLHLHVISQDFES KHLKNKKHWNSFNTAFFRDSVDIIEEVSNHGKATLKDDDKLLSMELRCQRCKSAHPNIPR LKSHISSCQAPFPAYLLENGCLVSACTR NT seq 2247 nt NT seq  +upstreamnt  +downstreamnt atggacctcgacaacaaagatgcaaaacccattttggtaatcttagtgggtgcgcctgga agcgggaaatcaaccttctgtgatgaggttatgcgttcctcttctcgtccttggcttcgc gtttgtcaggacactattggaaatggtaaagcaggaactaaagctcaatgcttaagtagt gcagctagagcattgaaggatgggaagagtgtattcattgacaggtgcaatcttaacaga gaacagagatcagattttttaaagcttcggggtgaaacccaaatagatatgcatgcagtt gtacttgatcttcctgctaagctttgtatttctcgatctgttaaacgatctgggcatgaa ggaaatttgcaaggtggaaaagctgctgcagttgtgaatagaatgcttcaaagtaaagag ctgcccaaattaagtgaaggctttaaccgaataacattttgtcagagtgagagcaatgtc aaagatgctattgatacataccaaaaacttgggccactagagaacctttcacatggttgc tttggtcagaaaaatccagattccaaaatccaatctagtataatgaaattcctgaaaaag gcagaggttccagttgatactgcatctaaagaaaatgtcatcggagactctacttcccag actcctgggaaaaatgattccctctgcaaagataaggaaaaaattacatcaccgcatgat aattccaagttagggtcaaaggaaacaaaaggccaggctgataaatctgccggttcctat cacaatcaaatttctttggatgatcccccaacactggcatttccatctatttcaacagct gatttccaatttaaccatgacaaggcagctgatatcattgttgagaaggtcgcggagtac tcaaaaaagatggggaatgccaggcttgttctagtcgacttgacacacaagtcaaagatt ttgtccttagttaaatccaaagtggcagaaaagaacattgatacccaaaagttctttacc catgttggagacatcactcgccttcattccacaggaggtttgcggtgtaatgtcatagct aatgctgccaattggcggctaaaacctggtggcggaggagttaatgcatcaatttttgat gccgcaggtcctgaactggagtctgcaaccaaagaaaaagcgaagactctttcacctggg aatgctgttgttgtccctctaccttcttcttctccattgttcacaagagaaggtgtgacc catgtaatacatgtccttggacctaacatgaatccacaaagaccaaattgtcttaacaat gattatgaaaaaggctgcaaagttctccaagatgcttatgcatcactatttgaaggtttt gcatcaatcgttaggaaccagatgcagcataatgaaaaccttgggaaaaagactttggag ttgcaggatcagtctgaaaagtgttcaataaatcattccactaattctgatcaaaagagt aagagagatgctgatcatggaccggaaaaaagcaagaaatacaagggaactcacgatggt tttgaattgacctttacgggttctaaggatgaaaaggtagattcagagcatagaagaact gatggcagcacgaggaaggcttgggggtcatgggctcaagctcttcaccaaatagctatg catcctgaaaagcataaggatcacttgcttgaaatttcagaagacattgttgtattgaat gatatgtatcctaaggcacagaagcatgttctggtgttgtcacgtagtagaggtcttgat tgcctgtcagatgtccaagaggagcacctttcggtattgaaaaggatgcatgcagtgggt ttaaaatgggctgagaaattcttgagcgaaaatgcttcactagtatttcgccttggatat cactcggctccgtcaatgcgacaactacatttacatgttattagccaggacttcgaatca aagcatttgaaaaataagaagcattggaactcgtttaacactgctttctttcgtgactca gtagatataattgaggaggtatctaatcatggaaaagcaacattgaaagatgatgacaag ctactgtctatggagttgaggtgccaaagatgtaaaagtgcacatccaaacataccgcgc ctaaaatcacatattagtagctgccaagcaccctttcctgcttacttactcgaaaacggg tgtttggtcagtgcatgcaccaggtaa

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