Trifolium pratense (red clover): 123902502
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Entry
123902502 CDS
T08949
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123902502
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
90S particles
Other 90S particles
123902502
Pre-60S particles
Other pre-60S particles
123902502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
123902502
NCBI-ProteinID:
XP_045808209
LinkDB
All DBs
Position
LG1:18845961..18855098
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AA seq
1281 aa
AA seq
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MEGIEMEQSTFPTDESTNDDFCNSILSRFGNSPNESHQQLCASTGSLSQLLKDQKKQLSP
AAYFGAACFSLNSMLKEPNPNYHIIEAVLTILSLVIVKLPGDALRMGRESVSELVPRVIV
SPSIPESSVVNGLKCVSHLLMVRDSDHWSDVSPLFNVLLGFLTDSRPKVRRQSHLRLREV
LINFQKSSLLASASEGIVNLLERFLLLAGGANANPGEGTMGAQQVLYILDALKECLPLLS
LKYKNNILKHYKTLLLLGQPLVTRRITDSLSFLCLYPTSEVSPEALLEVLCTLSALSTSS
NEMSGDGMTSTARLLDAGMKKVFSLDRQMCVIKLPSVFNDLKDILASEHEEAIFAASDAL
KNMINYCIDESLIKQGVDQITLNESRRSGPTIIEKICATVDSLLGYHYAAAWDRVFEVVS
AMFNKLGNNSPYFMRGILQNLEDMQKMPDEDFPFRKQLHACLGSALVAMGPETLLSLIPL
NLEAEDSSVSNIWLFPILKQYIIGAPLKYFTEEILPMIERVREKAQKLEKQGLMVSSRNA
DTLVYSLWSLLPSFCNYPSDTAKSFKDLEKHLRSKLKEEPDIRGIICTSLQLLIRQNKNI
KDSNDKDEDMAKEQVLVNYSQQVATENLRALEISAKNMLKDLSDVFLKSTKDDGGCLQGT
IGDMASIAEKKVVQNLFKKKMSDLLKCTQKANNDNSESSMHIDESNDVSQSVQRARLLDF
AVSLLPGLDVKDIDLLFQVLKPALQDVGVMQKKAYKVLSIMLRSSDSFVSSKLEVLPGLM
VEILPCHSSAKRHRLDCLYYLIVHVLKSEAVKAEFLYFLTVHDSKVKEDDSTTWPEVFLT
EMILALKEANKKTRNRAYEVLVEIAHAFGDEERGGNKNNLYQFFIKVARGLVGKTPHMIS
ATVKGLARLAYEFSDLVLTAFDLLPSTFVLLEKKNREITKANLGLLKVLVAKSQAEGLQM
HLRSVVECLFKWQDAAKNHLKAKVKLLLGMLITKCGLEAVKAVMPEEHMKLLSNIRKIKE
RKERNKGAKSEETRSHVSKATTSRQSRWNHTDIFSDFDGGSTAGSNAEYLNGRTVGRSST
HLKSAPSSFRANMRLKRNLSGDLSDESDDEPLDLLDREKTRSALRSSLKRKSRLDDDEIE
VDSEGRLIIHDEGEQTKETPAESEYDARSEPDSHLSARSGTKAQKKRRKTESGRAYTGKE
YASKKAGGDIKRKDKLEPYAYWQLDRKMMSRRPQHRAAAKKGMASVVNMTKRLEGKSASA
ALKLNSKGMKLKRNQRKGANK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatcgaaatggagcaatcaacattccccacagacgaatcaaccaacgacgat
ttctgcaattcaatcctctctcgattcggtaactcccccaacgaaagtcaccaacaactc
tgcgccagcacaggctcattgtcacagttgctcaaagaccagaaaaaacaattatcaccg
gctgcatacttcggcgccgcttgtttttcactcaatagcatgttgaaggaacctaatcca
aattaccacatcatcgaagcggttctcacaattctatcacttgtaattgttaaacttcct
ggtgatgcgttgaggatggggagagagtctgtgtctgagcttgttccgagagttattgtc
tctccgtcgataccagagagttcagttgttaatggattgaagtgtgtttcacatttgttg
atggttagagatagtgatcattggtctgatgtttctcctttgttcaatgtgttgttaggg
tttctcactgattcacgacctaaggtccgaaggcaatctcatttgcgtctccgagaagtc
ttgataaactttcaaaagtcttcgctattagcatctgcaagcgaaggcatcgttaactta
cttgaaaggtttctactgcttgccggtggagcaaatgcaaatcctggggaaggaactatg
ggagcccagcaggttttatatattcttgatgccttgaaagaatgccttcctttgttgtcg
ctaaaatacaagaacaacattcttaagcattacaaaactctattgcttctgggtcaacct
ctagtcactaggcgcataacagatagtttgagttttctctgtctttacccgacatcagaa
gtttcccctgaagcactacttgaggtgttatgcacattatcggctctttctacctcatca
aatgagatgtctggagatggaatgacatctactgctcgcttgcttgatgctggaatgaag
aaagttttttctctagacaggcaaatgtgtgtaattaagcttcccagcgtctttaatgat
ctcaaagatattttggcttctgaacatgaagaggccatattcgcagcctcagatgcattg
aagaacatgatcaattattgcattgatgaaagtttgattaaacaaggagtggatcagata
actttgaatgaatcaaggaggtcaggaccaaccattattgagaaaatttgtgcaactgtt
gacagcttacttggttatcactatgctgctgcctgggatagagtatttgaagttgtttcc
gctatgtttaacaaattaggaaacaactctccttactttatgagaggtatactccaaaac
ttggaagatatgcagaagatgcctgatgaagattttccctttaggaaacagcttcatgca
tgtcttggatcagctcttgttgcaatgggacctgaaactttgttatcccttataccattg
aatttggaagctgaagattcatctgtctcgaatatatggctctttccaattctaaaacag
tatattattggtgcgcctctaaaatattttacagaggaaattttgcctatgattgaacgt
gtaagggagaaggctcaaaagcttgagaagcaaggattgatggtgtcatcaaggaatgca
gacacgctcgtttactctttgtggtctttgctaccttcattttgtaactatccttcagac
acagctaaaagtttcaaggatctagagaaacatttgcgaagtaaactaaaagaagaacct
gatattcgtggaataatatgcactagtttgcagcttctgattagacaaaacaaaaatatt
aaggactcgaatgataaggatgaggatatggccaaagaacaagttttggttaattactca
caacaggttgcaactgaaaatttgagggcactggagatatctgcaaagaacatgttaaaa
gatctgtcagatgtgttcttaaaatctacaaaagatgatggtggttgtttgcagggcaca
attggtgacatggcttctatagcagaaaagaaagtcgtacaaaacttatttaagaagaaa
atgtcggaccttttaaaatgcactcaaaaggccaacaatgacaattccgaaagttctatg
catattgatgaatcaaatgatgtgtctcaatcagttcaaagggcacggcttcttgatttt
gcagtttcattgttgcctggattagatgtgaaagatattgatttattatttcaagtatta
aagccagcattgcaggatgttggtgtcatgcagaagaaggcatacaaagttctttcaatc
atgctcaggagctcagatagttttgtttcgtctaagcttgaggttcttcctgggcttatg
gttgaaattcttccttgccattcttctgccaaacgtcatagacttgattgcctttactac
ttgatagtccatgttttgaagtcagaggcagtcaaagctgagtttctttacttcttaaca
gtccatgactcgaaggtaaaggaggatgattcgacgacctggccagaagttttcctcact
gagatgatactggctcttaaagaggctaataaaaaaaccaggaacagggcttatgaagtt
ctggttgaaattgcccatgcatttggagacgaggagagaggcgggaacaaaaataacctg
tatcaattttttatcaaggttgctcgtggccttgttggaaaaactccacatatgataagt
gcaacggtcaaaggtttagctcgcttggcatatgagttttctgatcttgttttaactgct
tttgacttgcttccatccacatttgtgctgcttgaaaaaaagaacagggagataactaag
gccaatcttggtttattaaaggttttagtagccaaatcacaagcagaaggattgcaaatg
catctgaggagtgtggttgagtgtttgtttaagtggcaagatgccgccaaaaatcattta
aaagcaaaggtcaaacttcttttgggaatgcttatcacaaagtgtggattggaggccgtt
aaagctgttatgcccgaagagcatatgaaacttctgtctaacatacgcaagatcaaggag
cggaaagagaggaacaaaggtgctaaatctgaagaaactaggtctcatgtttcaaaagca
actacatccaggcaaagtagatggaaccatacagatattttttcggattttgatggaggg
agcaccgctggtagtaatgcagaatacctgaatggcaggacagtgggtagatcttccaca
catctcaaatcagcaccatcttcatttagggccaatatgagactgaaaaggaatttgtct
ggggacttatctgacgaatcagatgatgagccgcttgatttgcttgatcgggagaaaaca
aggtctgctcttagatcgtctctcaaaaggaagtcaaggttagacgatgatgagatagag
gtagattctgaaggacgtttgattatccatgatgaaggggaacaaacaaaggaaacccca
gcggagtcagaatatgatgctaggagcgagcctgatagtcatttgtctgcaagatctgga
actaaagcccaaaagaaaagaagaaaaacagagtccggtagggcttacactgggaaggaa
tatgctagcaaaaaagcaggtggagatataaagaggaaggataagctggaaccttatgca
tattggcaacttgatcggaaaatgatgagtcgccgaccacaacatcgggctgctgcaaaa
aaaggtatggcttctgtggtaaatatgacaaaaaggctcgaaggcaagagtgcctctgcc
gcgcttaaactgaatagtaagggtatgaaactaaaaagaaatcaacgaaagggagcaaac
aaatga
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