KEGG   Trifolium pratense (red clover): 123902673
Entry
123902673         CDS       T08949                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpra03009]
    123902673
Ribosome biogenesis [BR:tpra03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    123902673
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_SPT8 WDR54 Beta-prop_IFT122_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd Beta-prop_SCAP WD40_RFWD3 Beta-prop_LRRK2 PROPPIN Beta-prop_DCAF12 Ge1_WD40
Other DBs
NCBI-GeneID: 123902673
NCBI-ProteinID: XP_045808411
LinkDB
Position
LG1:complement(33061657..33066524)
AA seq 439 aa
MEVVLASSSVDDGIGCWDIHTGAEQPRYKSCSSPFHGLVSLGSRFLASSQLQHSSSTSGS
VFFWSFSKPQVEVKSFPVEPIKPLAGNHQGTYLAGGALSGDIYLWEVETGRLLKKWHAHL
RAITCLVFSEDDSLLISGSEDGYVRVWSLFRLFEELSNWEAKNLYEYSFSEHTMRVTDVV
IGYGASNAIIVSASDDRTCKVWSLSSGRLLRSIVFPSIINSIALDPAEHVFYAGSSDGNI
YIAALNTDRITTTNNYGKHIIGSFSNHSKTVTCLTYGKVGDLLISGSEDGIVRAWNAKTR
NIVRMFKHAKGPITNVLVVRQEIDPSNHMSSNLQASTKKKPLEKYANSTDEDSDVKTVIS
LGSSRECMDVSYHSSNVISIHTKELQQQGSAAASDIEIEKLKHEHERTMKMANQWKKMYE
NLHQFGIKELLDGDQIRTL
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggaggttgttttagcatcttcctctgttgatgatgggataggttgttgggacattcat
acaggtgctgaacagccacgctataaatcatgttcttccccttttcatggtctagtctct
ctcggttctcgcttccttgcttcttctcagcttcaacactcatcttctacctctggctcc
gttttcttctggtccttctcaaagcctcaagttgaagttaagagctttcctgttgaacct
attaagccacttgctggtaatcaccaagggacctatctagctggtggagctttgtcaggt
gatatatacttgtgggaggttgagactggcagattacttaagaagtggcatgctcattta
agggccataacttgcctggtattttctgaagatgactcattgctgatatctggttccgaa
gatggatatgtaagagtttggtctcttttcagattattcgaagaattgagtaactgggaa
gcaaaaaatctgtacgagtatagtttttcagagcacaccatgcgcgtaactgatgttgtg
attggttatggtgcatccaatgcaattatagtttcagcatcagacgatcgtacgtgtaag
gtatggagtttatctagtggaagactactaagaagcatagttttcccttcaataattaat
tccattgcattggatcctgctgaacatgtgttttatgctgggagcagtgatggaaatata
tatatagctgcacttaacactgatagaatcactactactaataactatgggaagcatatt
attggttcattctctaatcacagtaagacagttacttgcttaacatatggcaaagttgga
gatttgttgatttctgggtctgaggatggaatagtccgtgcttggaacgctaaaactcgc
aacattgtccgcatgtttaaacatgctaaaggtcctataactaatgttcttgttgttaga
caagaaattgacccaagtaatcatatgtcttctaatttacaagcatccacaaaaaagaag
cctttagaaaagtatgcaaattcaacagatgaagattctgatgtgaagactgttatcagc
ctagggagtagcagggaatgcatggatgtttcataccacagttctaatgtgatatctatt
cacactaaagaacttcagcaacaaggttcagccgctgcttctgatatcgagatagaaaaa
ctaaaacatgagcacgaaaggacaatgaagatggctaaccaatggaagaaaatgtatgaa
aacttacatcaattcggtataaaggaactattagatggtgatcaaataagaaccttatga

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