Trifolium pratense (red clover): 123902713
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Entry
123902713 CDS
T08949
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123902713
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
123902713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_IFT122_2nd
DUF3822
Motif
Other DBs
NCBI-GeneID:
123902713
NCBI-ProteinID:
XP_045808454
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All DBs
Position
LG1:complement(1028323..1034618)
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AA seq
1326 aa
AA seq
DB search
MKNLKLFREVPLSLRLNSDDETLRFSALDIERNRLFFLSSHNFIYTSHLSSFHVKEAWSK
NSLLSADYGSVDLEPDDNVTSFDYLMEKEAILIGTSNGLLLLFDVDANVTQVVGNVDGGV
NCISLSPDGELLGVITGFGQILVMTHDWDLLYETQLVDDDVVPEGHHVNGESFPEGGFEQ
YPISWRGDGKYFATMSVCGSNLSRKLKIWDRDSGALLASSEEKAFAGAVLEWMPSGAKIA
AVYDRKAENECPSIVFFERNGLERSKFSVGEGINAKVKFLKWNCSSDLLAGVVECENYDA
IKIWYFSNNHWYLKHETRYLKQDEVRFIWNQEKSLQLISWTLGGQVTVYNFVWITAVMDN
SVALVIDGSNIRVTPLSLSLMPPPMCLFSLKFSSHVRGMAVYCKNSKNQLAVSLSDGSLC
VVELPSIETWEELEGKEFSVEASHTEMLFGSILHLVWLDSHTLLSVSHYGFRHSNDLFQT
SPNECVLAGFYLQEIELECSEDIVPGMLTYSGWHATVSKQNTLEELVIGLAPNPASKYSA
YMQFSGGKIKEYLSKMGTGGGSLEQEYQGFSAACPWMGVALVGSAGQSKPVLFGLDEIGR
LHASGGIVVCNNCSTFSFYSNLEDQVTTHLILATKQDLLFIVDIGDIFNGEFDSKYGNFV
RINSRKREETENYIHIWERGAKIVGVLHGDEAATILQTTRGNLECIYPRKLVLVSIINAL
IQKRFRDALLMVRRHRIDFNVIVDYCGWQAFSQSAFEFVRQVNNLGYITEFVCSVKNENV
IEKLYKTHVSVPSSEVANAMLAGDLQNCPADNKVSSVLMAIRKALEEHFTESPARELCIL
TTLARSEPPLLEDALKRVKVIREKELSHADDHKRMSYPSAEEALKHLLWLADGDAVYDAA
LGLYDLKLTAIVALNAQKDPKEFLPFLQELERMPTPLMQYNIDLRLKRFEKALRHIASAG
DSYYDDCMTLVKKNPQLFPLALQLFTDPAKRMPFLEAWGDYLSGEKCFEDAATIYLSCFN
LDKALKSYRAISNWSGVLTVAGLLNLGKDEVLHLAGELCEELQALGKPGEAAKIALEYCG
DVNSGVNLLISARDWEEALRVVYMHRREDLVKVVKDASVECASTLTNEYEEGLEKVGKYL
TRYLAVRQRRLLLAAKLQSEKREGSDIEDDAASEASSNFSGMSAYTTGTRKSSAASTLST
ATTRAREARRQRKRGKIRPGSADEEFALMDHLKGMSLRVEARRELKSLLVALMMFGEGET
ARKLQQMGENFQLSQMAAVRLAEDTISNDTINEYAHTLEQYTRKVRDEMNNSEALSWRIK
VFLTYE
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttaaaactcttccgtgaggttcctttatctctccgattaaactccgacgat
gaaactttacgattctccgccttagatatcgaacgcaaccgtctcttcttcctctcctcc
cacaatttcatctacacttctcatctctcttccttccacgtaaaagaagcttggagtaag
aactcattgttatctgcggattatggaagcgttgatcttgaacctgatgataatgttact
tcttttgattatctcatggagaaagaagcgattcttattggaacttcgaatgggctttta
ttgctttttgatgttgatgctaatgtaactcaagttgttggtaatgttgatggtggtgtt
aattgcatttcacttagtcctgatggtgaacttcttggtgtaattactggttttggtcag
attttggttatgactcatgattgggatttgttgtatgaaacacaacttgttgatgatgat
gttgttcctgaaggtcatcacgtaaatggagaaagctttccggagggtgggtttgagcag
tatcctatatcttggcgaggagatggaaaatactttgctacgatgagcgtgtgtggttct
aatttatcgcggaaacttaagatttgggatcgagattcgggggcattgcttgcttcttcg
gaggaaaaagcatttgctggagctgttttagaatggatgcccagtggtgccaaaattgca
gctgtatatgacagaaaagctgaaaatgaatgcccttccattgttttctttgagagaaat
ggattagaaagaagcaaatttagtgttggtgaaggaattaatgcaaaagtaaaatttctg
aagtggaattgcagttctgatcttcttgcaggtgttgttgaatgtgaaaattatgatgct
ataaagatatggtattttagcaacaaccattggtacctgaagcatgaaactagatacttg
aagcaagacgaagtgaggttcatatggaatcaagaaaaatctttgcagttgatttcttgg
actcttggtggtcaggttacagtttacaactttgtttggatcacggctgttatggacaat
tctgtcgcactagtcatcgatggctccaatattcgtgtaacaccactctccttatcatta
atgccacctcctatgtgtttatttagcctaaaattttcttcccatgttcggggaatggct
gtatattgtaaaaactccaagaaccagttagctgtatctctttcagatggtagtttatgt
gttgtagagcttccatcaattgaaacctgggaagaactagaggggaaagaattcagtgtt
gaagcttctcatactgaaatgttgtttggatccatattacatcttgtatggttggattcg
catacgctgttatctgtttcacattatggtttcaggcacagtaatgacttattccaaacc
tcaccgaatgagtgtgtacttgcaggcttctatttgcaagaaatagaacttgaatgttct
gaggatattgttccaggaatgctgacatattcaggctggcatgcaacagtttcaaagcaa
aatacccttgaagagcttgttattggccttgctccaaatcctgctagtaaatattctgca
tatatgcagttttctggggggaaaatcaaagagtatttatcaaaaatgggcactggtggt
ggatctctagaacaggaatatcaaggtttttctgcagcctgcccttggatgggtgtagca
ctggtcggaagtgctggccagtcaaaaccagtgctttttggactggatgagatcggcaga
ttgcatgctagtggggggatagtagtttgcaacaactgcagtactttctcattttactca
aatttggaagatcaagttacgacacatctaattcttgcaactaaacaagatctgcttttt
attgttgacattggtgatatatttaacggggagtttgactcaaagtatgggaattttgtc
cgcattaacagcagaaaaagggaagaaactgaaaactacatacatatatgggagagagga
gctaaaattgtcggagttttacatggagacgaagctgccactatactgcaaactactcgg
ggaaaccttgaatgtatataccctagaaaattggttttggtttctatcattaatgcctta
attcaaaagcgatttagagatgcattacttatggtcaggaggcataggatagatttcaat
gttattgttgattactgtggttggcaagcattttcacaatcagcttttgaatttgtcagg
caggtcaacaatctgggatatataactgagtttgtttgttctgtaaagaatgaaaatgtc
atagagaaactctacaaaactcatgtatctgttccctcttcagaggttgctaatgctatg
ctagctggagacctccaaaattgtcctgctgataacaaggtttcttcagttctgatggcc
ataaggaaagcacttgaggagcactttacagaaagtcctgcaagggagctttgcatatta
accactcttgctcggagtgagcctccgttacttgaagatgctctaaagagggtcaaagtt
attcgtgaaaaggagttgtctcatgctgatgaccacaagagaatgtcttacccttctgct
gaagaagctttgaaacatctattatggttggccgatggggatgctgtttatgatgctgct
ttgggtctttatgatttaaaactcacagctattgtggcattgaatgcccaaaaagatcca
aaagaatttcttcctttcttgcaagagttggagcgtatgcctacaccattaatgcaatat
aatattgaccttaggctgaaaaggtttgaaaaggctctcagacatattgcttctgctgga
gattcttattatgatgattgtatgacactagtgaaaaaaaatcctcaactttttccattg
gctcttcaactttttactgaccctgccaagaggatgcccttccttgaggcttggggtgat
tatcttagtggggaaaaatgctttgaagatgctgctacaatttacttgtcctgtttcaat
ctggataaggcgctgaagtcttatcgtgctattagtaactggagtggggtacttacagtt
gctgggttacttaatctgggaaaggatgaagtactgcatcttgctggtgagctttgcgaa
gaacttcaagcacttggtaaacccggtgaagctgccaaaattgccctggagtactgtgga
gatgtcaactctggtgtgaatttattaatttctgcaagggattgggaggaggctttgagg
gttgtttatatgcacagaagagaggacttagttaaggttgtcaaggatgcatctgttgaa
tgcgcaagcacgcttaccaatgaatatgaggaaggcttagagaaagtagggaaatacttg
acccgctacttggctgttcgacaaagaagactacttcttgcggcaaagctccagtcagag
aaacgtgaaggtagtgatattgaagatgatgctgcttcagaagctagcagtaattttagt
ggaatgagtgcatacaccacagggaccaggaaaagttctgctgcttctactctttcaact
gcaactaccagggcaagagaggctaggcgtcagaggaaaagaggaaaaatccgtcctggg
agtgctgatgaggagttcgccttgatggatcatttgaaaggcatgtctctgagagtggaa
gcaagacgagagctgaaatctttgttggttgccctcatgatgtttggtgagggtgaaaca
gcaaggaagctacagcaaatgggggaaaattttcaattgtctcagatggcagcagtcaga
ttagctgaggatacaatatcaaatgataccataaatgagtatgcacatactttggagcaa
tatacccgaaaagtaagagatgaaatgaacaattcagaggctttgtcgtggcggatcaaa
gtttttttgacctatgagtga
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