Trifolium pratense (red clover): 123902759
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Entry
123902759 CDS
T08949
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
123902759
Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
123902759
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
Beta-prop_ELP1_1st
KNTC1_N
Beta-prop_Nup120_160
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
123902759
NCBI-ProteinID:
XP_045808500
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All DBs
Position
LG1:complement(3479278..3483923)
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AA seq
609 aa
AA seq
DB search
MATLSETYACAPSTERGRGILISGDPKTNNILYCTSRSVIIRNLDNPLQVSVYGEHSYPV
TVARYSPNGEWIASADVSGTIRIWGTHNDYVLKNEFRVLSGRIDDLQWSADCQRIVACGD
GKGKSFVRAFMWDSGSTVGDFDGHSRRVLSCAFKPTRPFRIVTCGEDFLANFYEGPPFKF
SMSIRDHTNFINCVRYSPDGNKFITVSSDRKGIIYDGKTGNKLGEFSEEDGHKGSIYAVS
WSPDSKQVLTVSADKSAKVWNIDENGSGTVHKTLTYTESGGVEDMLVGCLWQNDHLLTIS
LGGTINLYSAKDLDQSPKSLSGHMKNVTVLNLLNKSDKMLLSSSYDGVIIRWIPGIGYSG
KFDGKQFGLINLLEAAEEEVVTAGFDNKVYRVPLHGDNFGPAEHVDVGSQPKHVALALNS
PQFALIAIESGVVLLNGAKIVATVNLGFVVTACTISPDGSEAIVGGQDGKLRIYSISGDT
LTEQTVLEKHRGAISAIKYSPDVSMFASADLNREAVVWNCASREVVLNNMLFHTARINCI
SWSPDSKLIATGSLDTCVIVYEIGKPAASRRTIKGAHLGGVYGLTFIGPETVVSSGEDSC
IRVWNLIAE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctctctgaaacctacgcatgtgcaccttccaccgaacgcggccgtggcatt
ctcatctccggcgatcccaaaaccaataacattctctattgcacctcacgatccgtcatc
attcgtaatctcgacaatccattacaagtttccgtttatggcgaacattcttaccctgta
accgtcgcccgttattcccctaacggtgaatggatcgcgtccgcggatgtctccggtacc
atccgcatttggggaactcacaatgattatgttcttaagaatgagtttcgtgttctctct
ggtcggatcgatgatcttcaatggtctgctgattgccagaggattgttgcttgtggagat
ggaaagggaaaatcatttgttcgcgccttcatgtgggattcgggttccactgttggtgat
tttgatggccattcgcggcgggttctaagttgtgcattcaaaccaacaagaccattccgc
attgtcacttgtggagaagattttttggcaaacttttatgaaggtccaccattcaagttc
agtatgtccattagggaccatacgaatttcatcaattgtgttagatattctccagatggg
aacaaatttattacagtcagctcagatagaaagggtattatatatgacggaaagactggg
aataaactcggagaattttctgaagaggatggtcacaagggcagcatatatgctgttagt
tggagtcctgacagtaaacaggttcttactgtgtctgctgacaagtctgcaaaagtatgg
aatattgatgagaatggtagtggaacagtacataagacattgacatatactgaatctggt
ggggtggaggacatgctcgtcggttgtctttggcagaatgaccatctgcttactatctcc
cttggcggaacgattaatttatactctgctaaggatctagatcagagcccaaagtcctta
tctggtcacatgaagaatgtaactgttttgaatctactcaacaaaagtgataagatgctt
ttgtccagcagctatgatggagtgatcattagatggattccaggtattggttacagcggt
aagtttgacggtaaacaatttggattaatcaatttattagaagctgccgaagaagaagtt
gttactgctggatttgacaacaaggtatacagagttccccttcatggggataactttggt
cctgctgagcatgttgatgttgggagccagcctaagcatgtggcgcttgcacttaattcc
cctcaatttgctcttattgcaattgaatccggggttgtcttacttaacggtgcaaaaatt
gtggccactgtaaaccttggctttgttgtgaccgcatgtactatttcacctgatggcagt
gaagcaattgtaggtggacaggatggtaagctccgtatttattctatctcaggagataca
cttactgaacagactgttcttgagaagcaccgcggtgcaatcagcgcaatcaaatattct
ccagatgtttccatgtttgcatcagctgatctaaatcgcgaagctgttgtgtggaactgt
gcttctagagaggtggtgcttaataacatgttatttcacactgcacgtataaactgcatt
tcttggtcacctgatagcaaactgatagctactggttcacttgatacatgtgtcattgta
tatgaaattggaaagccagctgcaagccgcagaaccataaaaggtgctcatttaggtgga
gtctatggattgacttttattgggccagaaacagtggtcagttcaggagaagatagttgc
attcgtgtttggaatttgattgcagaataa
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