Trifolium pratense (red clover): 123902831
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Entry
123902831 CDS
T08949
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123902831
03036 Chromosome and associated proteins [BR:
tpra03036
]
123902831
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123902831
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123902831
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123902831
microRNA pathway
RISC loading complex
123902831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
123902831
NCBI-ProteinID:
XP_045808589
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Position
LG1:complement(31106454..31114224)
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AA seq
981 aa
AA seq
DB search
MPLRQMKESSEQHLVIKPHMQNNMSQNQVKKVTKAVQNGKGSSPLLSQEQTSPPPQVKNG
GRRRSRNGRKSDQVDVLMRPSCRPCTTVVKNNDNGHVENGSIITSSDVEMSFPTSSKSLS
FAQRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSKAVNRSIIAELVRLYKE
SDLGMRLPAYDGRKSLYTAGVLPFSWREFKIKLIEEEDGINGPKREREYKVVIKFVARAN
LHHLGQFLAGKRADAPQEAIQILDIVLRELASKRFCPIGRSFYSPDIRTPQRLGEGLESW
CGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKSL
RGVKVEVTHRGSVRRKYRVSGITSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKHTHL
PCLQVGGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDRENDILRTVQ
HNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMI
NGMTVSRWACINFSRGVQDSVARTFCNELAQMCQVSGMEFNLEPVIPIYNAKPEQVEKAL
KHVYHVSSNKTKGKELELLLVILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQ
YLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVV
ASQDWPEVTKYAGLVCAQPQRQELIQDLYKTWHDPVRGVVSGGMIRDLLVSFRRATGQKP
QRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHR
DRNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGI
QSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPDLQETGSTGGRGSKTTRAAG
DCGVKPLPALKENVKRVMFYC
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaggcaaatgaaagagagttcagaacaacatcttgtgataaaacctcatatg
caaaacaatatgagtcaaaatcaagttaagaaagttactaaagctgttcaaaatggtaaa
ggttcttcaccattgttgtcacaagaacaaacttcaccaccacctcaagtaaagaatggt
ggaagaagaaggagtagaaatggtagaaaatctgatcaagttgatgttttgatgagacca
agttgtagaccttgtactactgttgtgaaaaataatgataatggtcatgttgaaaatgga
agcataatcacttctagtgatgttgagatgagttttcctacttcaagtaagtctttgagt
tttgctcaaagacctggttatggacaagttggtacaaaatgcattgttaaagctaatcac
ttctttgcagaattaccagacaaagacttgaatcagtatgatgtaactattacacctgaa
gtgtcgtccaaagccgttaacagatccattatagcagaacttgtgaggctgtataaagaa
tctgaccttggcatgagacttccagcgtatgatggccgaaaaagtttgtacacagcgggg
gttcttcccttttcctggagagagtttaagattaagcttatagaggaagaggatggaatt
aatggccccaaaagggaaagagaatacaaagttgtgatcaagtttgttgcaagggctaac
ttgcatcacttggggcaatttctagctggaaagcgtgcggatgctccacaggaggcaata
caaattcttgacattgtactaagagagctagcatcaaagaggttctgtccgattgggagg
tccttttattcacctgatattcgaacaccacaacgactcggagaaggattggagtcatgg
tgtggattttaccaaagcataaggcctactcagatgggcctttccctcaatatcgatatg
gcttctgctgcgttcattgaacctcttccggtggtggaatttgttggccagctattggga
aaagatgtgctgtcaaggcagttgtctgatgcggatcgaatcaagattaagaaatccctt
agaggagttaaagttgaagtaacacacagaggaagtgttagacgaaagtatcgtgtttcc
ggtataacgtctcaaccaacaagagaacttgtgtttcctgtcgatgagaactcaacaatg
aaatcagtggttgaatacttccaagagatgtacggtttcactattaaacatacacacctt
ccgtgccttcaagttggtggaaatcaaaagaaagcaaactatttacctatggaggcctgc
aaaattgtcgaggggcaacgatatactaaaaggttgaatgaaaagcaaattacttctctt
ttgaaagtcacgtgccagagacctcgtgatcgagaaaatgacattttgcggacggttcag
cacaacgcttatgatcaagatccttacgcaaaggaattcgggattaaaatcagcgagaag
ttagcttcggtggaagcacgaattcttcccgctccttggcttaagtatcacgagagtggg
aaagagaaaaattgtttaccccaagttggccagtggaatatgatgaacaagaaaatgatt
aatggaatgaccgttagccgctgggcatgcatcaatttttcacgaggcgtgcaggatagt
gttgctcgtactttttgtaacgagcttgcgcaaatgtgtcaagtatctggcatggaattt
aatctggagcctgttatcccgatctacaatgcaaaacccgagcaggtggagaaagctttg
aagcatgtttaccatgtgtcatcgaacaaaaccaaaggaaaggaattggagcttttgtta
gttatattgccggacaacaatggttctctctatggcgatctcaagcgtatttgcgagact
gaccttggtttaatttctcaatgttgtctgacaaagcatgtctttaagatcactaagcag
tacttagccaatgtgtctctgaagatcaacgttaagatgggtggtagaaacaccgttctt
gttgatgcggtaagctgcagaataccattggttagtgacataccaacaataatatttgga
gcagatgttacccaccctgaaaacggggaagactccagcccctcaatagcagcggtagta
gcgtcgcaagattggcctgaagttacaaagtatgcaggtttagtatgtgctcaacctcaa
agacaagaacttatacaagatttgtacaaaacttggcacgaccctgttcgtggtgtagtt
agtggtggcatgatccgagatttgttggtttcgtttagaagggcaaccggacagaagcca
caaaggattatattttacagggatggtgtaagtgaagggcagttttaccaagttttacta
tacgagttggatgcaattcggaaggcgtgtgcttctttggagccaaactatcaaccacca
gtaactttcatagttgtacaaaaacgacatcatactcggttattcgcaaacaaccacagg
gacagaaacagcaccgataggagtggaaatatcctgcctggaactgttgttgataccaaa
atctgtcatccaacggagtttgatttttatctctgcagtcacgctggcatccagggtaca
agtcgtccagcgcattatcatgttctatgggatgaaaataacttcacagcagacgggatt
cagtctttgacaaacaatctctgttatacatatgccaggtgtacacgctccgtatctgtt
gttcctccagcatattatgcacatttagcagcttttcgagcccgcttctacacagagcca
gacctacaggagactggctccaccggtggtcgtggttcgaaaacaacacgtgcagccggt
gattgcggtgtcaagccattgccagcgttgaaggaaaatgtgaagagagttatgttttat
tgttag
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