Trifolium pratense (red clover): 123902890
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Entry
123902890 CDS
T08949
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123902890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123902890
03036 Chromosome and associated proteins [BR:
tpra03036
]
123902890
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123902890
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123902890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
123902890
NCBI-ProteinID:
XP_045808667
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All DBs
Position
LG1:complement(36351187..36362141)
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AA seq
707 aa
AA seq
DB search
MSPDAVGNGALIPFSGETNDSLAVYPLHHGLARPISRVALSWSRGNSLRVSLFAEPSGSS
DTGDGAKVIEVKLGGGDPEIDDADWRRIAYGSVAPFALLQSRRNSLPALSKSPYHLDWWE
HVLQYSKDISSLLTGPKLAPNPIIEDPNEIVTKNEEPTCLKAAWELMEIFYVDKQSQAWL
PEKLVDWLADYDSLFTSTQETIHGKLVDFQNDLVNIQVIEDDPRYWEVMSSALSVGWLDI
VVKMLRLHGSYQIDQLSKRELENGLVEAVAVLISKMPRLRPESAAGNLGECFKSKPDFTK
AWEKWRSQITKLDCSPYWIQCDNQQTREGLRNMLQVMLGNTENLCTASCYWIELYVSHFL
YIRPFTTGIESMYNLAQKCIQLKTPTGTHRLTGLMIGILAENTEVVIAEISREFGPWMVA
HAVELLTSGSEEAEILLHDERYNLGGISMVELHRLAYAQVLSSHALTWQIAPIYLTSCMK
QGMGLLENLLYRQSVQHNNLLLKNIEICRLYELDHISSNIMKVAGVYHWKHGRKGAGVFW
LQQSQDTNCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYRDFK
KSLQMVYSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLFDSLKLLNWKDSPLLSVSET
NLLLNKLQELSLARQRPHFTEPNLPPQALSSIRLALATNLGRAILDE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgacgccgtcggcaacggagctctgatcccattctccggcgagaccaacgat
tcactcgcagtttatcctctccaccatggtctcgcccgtccaatttctcgcgtagctctc
tcctggtcccgtggaaactcccttcgcgtttcccttttcgccgaaccttctggaagctcc
gatactggagatggcgcaaaggttattgaagttaagctcggcggtggagatccggaaatt
gatgatgccgactggcgaagaattgcctatggctctgttgctccctttgcgttgcttcaa
agtcgccggaactctcttcctgcattgtcaaaatctccgtatcatttagattggtgggag
catgtccttcagtatagcaaggatatatcatcacttctcacagggccaaagttggctcct
aatccaataatcgaagatccgaatgaaattgttacgaaaaatgaggagccaacatgtttg
aaagctgcatgggagttgatggaaatattttatgtggacaagcaatctcaagcatggcta
cctgaaaagcttgttgattggttagctgattacgatagcctctttactagtacacaggaa
acaattcatggcaagcttgtggattttcagaatgatcttgtcaacatacaggtgattgag
gatgatcctagatattgggaagtgatgtcatctgcattgtcagttggttggctagatata
gtggtgaaaatgctgcggttgcatgggtcttaccaaatagatcagctcagtaagcgtgag
ttagaaaatggattagtggaggcagttgctgttcttatttccaaaatgccccgattacgt
cctgaatctgctgctggaaatttaggagagtgctttaaatccaagcctgactttacaaaa
gcctgggaaaaatggaggtcacagattactaaactggactgcagtccatattggattcag
tgtgataatcaacaaactcgtgagggcttaagaaacatgctacaagttatgcttggtaac
accgagaatctctgtacagcttcatgttactggattgagttgtatgtttctcatttttta
tacatcaggccatttacgaccggaatagaaagcatgtataatttggcccagaaatgcatc
caattgaaaacaccgactggtacccataggttgactggtcttatgattggaattcttgca
gaaaatacggaggttgttatagcagaaatttcccgagaattcggtccttggatggttgca
catgccgtggaattgctaacttcagggagtgaggaagcagagattcttctacatgatgag
cgttataacttggggggaatcagtatggtggaacttcatcggcttgcatatgctcaagtt
ttgtcatcacacgcattgacctggcaaatagctccaatatatttaacatcatgcatgaag
caaggaatgggcttgctagagaatttattgtacagacaatctgttcaacataacaacctg
ttgcttaagaacatcgagatatgccggttgtatgagcttgatcatatcagttcaaatatc
atgaaggttgctggagtctatcactggaagcatggtcgtaaaggtgccggagtattttgg
cttcaacaatcccaagatacaaactgtcttgataggattgcacaacagttatttgattca
gttggaaagtcaatttccgacgaaagcttcaaacaatgggaaggcttaattgagttattg
ggttctgaatctaaacctgctgggggtcttgagtttttacacaagtatagagatttcaaa
aaatcccttcagatggtatatagtggaaaatcgactgatgcggcaagacaagctgtaggc
tccctcatactgcttatgaaaaatccatcaacccctcagcgcttttggttgccccttctg
tttgactcgttgaagttgcttaattggaaagatagtcctcttctcagtgtgtccgagacc
aatcttctattgaacaaacttcaagagttatctttggcgaggcagcgcccacacttcact
gagcctaacttaccccctcaagcgctgagttctattaggctggctctagctacgaatctt
ggccgtgctatactcgatgaatag
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