Trifolium pratense (red clover): 123902906
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Entry
123902906 CDS
T08949
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123902906
Transcription machinery [BR:
tpra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123902906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
LMBR1
Motif
Other DBs
NCBI-GeneID:
123902906
NCBI-ProteinID:
XP_045808684
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Position
LG1:complement(36456586..36461331)
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AA seq
546 aa
AA seq
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MGLCFGFKLNPKFSYTVPIHSPHLFLSSSSSAGGREVFFSPTRLSFLSTIYEEGETLHKD
FGKTFAFSPTALEAPQKDILQGGEVTKVNKGKRSLSSVHEMIDNTQLPFGESHFGLLMEN
LDALEETFADSEALRLKKNIILQLEKLGALELFNVCLTASSGTSPASTCTDGVLEQLELN
KRNHKVDDYTGKVVVQSSKRKENRTRRKRASVSIAPSSKSLPLEINQEDPLRSSPAASFV
KRSSNTKNTKNRRAMIAQREVEMAKGVKVLAELEKMRTAIEEDTKQAVSMSSWAEASGVN
QKALKQQLYHGYYCKDELLRSTRSLVLYFAKKYRGMGIALEDLLQVGYIGVLQGAERFDS
TRGYRFSTYVQHWIRKSMSKTVAKYARGITVPWSMNKAINQIKKARKVLRSTSMKYPEDH
EIAKMTGLSLDRIISASHCLRTVSSMNCGVEYPGYIPDMSIESPEKTVMKQHIRKDIHDV
LQCLDSRERQILILRFGLNDHKPKSLEYIGRIYKVSKAWIWQIEKKALTKLWNETNISKM
NYYLDL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctgttttggttttaaactaaacccaaaattcagttatactgtcccaattcac
tctcctcatctcttcctctcttcttcatcttctgctggaggcagagaagtttttttcagc
ccaacgaggttatctttcctttcaacaatttatgaggaaggagaaactttgcataaggat
tttggaaagacgtttgcattttcgccaacagcattggaagcaccgcaaaaggatatattg
caaggcggagaagtaacaaaggtaaataaaggaaagaggtcgcttagtagtgtgcatgaa
atgattgataacacgcaattgcctttcggggagtcacatttcggtttgttaatggagaac
cttgatgctttagaagaaacgtttgcggattctgaagcattaaggttgaaaaagaatatt
atattgcaactagaaaagcttggagctcttgagttgttcaatgtttgtctaacagcatct
tccggaacctcacccgcatcgacatgcactgacggagttcttgaacaacttgaattaaat
aagagaaaccacaaagtagatgactataccggtaaagttgttgtccaatctagcaagagg
aaagaaaatagaacaagaagaaagagagcatcggtttccatagcaccttcctctaagtcc
ttgcctttagaaattaatcaagaagatccgttacgttcttcgccggcggcttcttttgta
aaaagatcatcaaatactaaaaatactaaaaatagaagagcaatgattgctcaaagggag
gtggaaatggcaaaaggtgtaaaggttttagcagagttagagaaaatgagaacagctata
gaagaggataccaaacaagcggtaagcatgagtagttgggcagaagcatctggagtcaat
cagaaagcgctaaaacaacaactgtatcatggctattattgtaaagatgagttgttacgg
agtactcgttccttagttctatactttgccaaaaagtacaggggcatgggaatagctttg
gaagatttgcttcaggtaggatatataggtgttctccaaggagcagagcgatttgacagt
acaaggggataccgattctcaacctatgtgcagcactggataagaaaatcaatgtcaaaa
acggtggcaaaatatgctcggggaatcactgttccttggtcaatgaacaaggcaataaat
cagatcaagaaagcacgaaaagtcttgagaagtacgtctatgaaataccccgaagatcat
gaaattgcaaagatgacaggtctttcgctggatagaatcatatcagctagccattgtctg
agaacagtttcttcaatgaattgtggcgtagaatatccgggttatataccagatatgtcg
atagagagtcctgaaaagactgtgatgaaacagcacattagaaaagatatacatgatgtc
ctccaatgtttggattcaagagagaggcaaatactaatcctacgtttcggccttaatgat
cacaaacctaagtctcttgaatatatagggaggatttacaaagttagcaaagcatggata
tggcaaatagagaaaaaagctcttacaaaattatggaatgaaacaaatatctcaaagatg
aattattatttggatctgtag
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