Trifolium pratense (red clover): 123903168
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Entry
123903168 CDS
T08949
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
tpra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123903168
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123903168
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123903168
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123903168
03036 Chromosome and associated proteins [BR:
tpra03036
]
123903168
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123903168
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123903168
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123903168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_8
EF-hand_6
EF-hand_1
EF-hand_5
DUF4187
Phage_Inh_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
123903168
NCBI-ProteinID:
XP_045809040
LinkDB
All DBs
Position
LG1:14741313..14751246
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AA seq
537 aa
AA seq
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MSMEVVTDAASLDVELLQLPEFSTLALKTNINFVEKLFEQWLSLPESNRLVTSLLNDAKS
GAPLNVPGSCSSPNAASNTLPSMFPAGTAPPLSPRSSSGSPRIVKQRAGPSNLGSPLKVV
SEPIKEVIPQFFFQHGRPPPNDLKEQCLFKTDQLFHDHLDGLQVHEFKSITKEVCKLPSF
FSTSLFRKIDNGAGVVTREAFIDYWINGNLLTMDLATQIFTILKQPQLNYLTQDDFKPVL
RELLASHPGLEFLQSTPEFQERYAETVVYRIYYYINRTGNGRMTLRELKRGNIIDAMQHA
DEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQ
VPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDANGILTRNELQFFYEE
QLHRMECMAQEPVLFEDILCQIIDMIHPEDDSYVTLRDLKGSKLSGSVFNILFNLNKFMA
FETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESLEAPF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggaggtagttactgatgcggcgtcgttggacgtcgaattgttgcagctccct
gaattttccactttggctctcaaaactaatatcaatttcgttgagaagctatttgaacag
tggttgtcgcttcctgaaagtaatcgattggtaacatcattgctcaatgatgctaagtca
ggggctcctttgaatgttcctgggagttgctctagcccaaatgctgcgagtaatacattg
ccttccatgtttccggctggcactgctccgccactttcaccaagaagttcatccggttct
cctcgcattgtgaaacagagagccggcccttctaatttgggctctcctttgaaagttgtc
agcgagccaattaaagaagtgataccccagtttttctttcaacatggacggccacctcca
aatgatctaaaagaacaatgtttgtttaaaactgatcagttattccacgatcacttggat
ggactgcaggtgcatgaattcaaatcaattactaaggaagtatgcaagctgccatcattt
ttttccacttctcttttcagaaaaattgacaacggagccggtgttgtgacaagggaagca
tttattgattattggattaatggcaacctgttgacgatggatttagctactcaaatattc
acaattttaaagcaaccacagctgaattacctaactcaggatgattttaaacctgtccta
cgcgagcttttagcaagtcatccgggcctggagttcctgcagagcacacctgagtttcaa
gaaagatatgctgaaactgtagtataccgaatctattattacattaatagaaccggaaat
ggtcgtatgactctgagggagcttaagcgtggaaacataattgatgcaatgcaacatgct
gatgaagaggaagacatcaacaaggttttgaggtatttctcttatgagcatttttatgtt
atatactgcaagttttgggagctggatacggatcatgatttcttgatagacaaagagaat
cttatcagatatggtaaccatgcgcttacctatcgaattgttgacagaatattttctcag
gtcccaagaaagtttaccagtaaggttgagggaaagatgggatatgaagattttgtttac
ttcatactctcagaggaggacaaatcatctgaacctagtcttgagtattggttcaagtgc
atagatttggatgcaaatgggattctgacaaggaatgagcttcaatttttttatgaggag
caattgcatcggatggagtgcatggcccaagagcctgtgctttttgaggatatattgtgc
cagataattgacatgattcatcccgaggatgatagctatgtaactctgcgtgacttgaaa
ggaagtaaactttcaggaagtgttttcaacatcctgttcaatctgaacaagttcatggcc
tttgaaactcgtgacccatttttgattcgtcaggaacgtgagaatccaacattgacagag
tgggatcgatttgctcatagagaatatattaggctttcaatggaagaagatgtagaagat
gtctctaatggaagtgcagaagtctgggatgaatcactagaggctcccttttaa
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