Trifolium pratense (red clover): 123903765
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Entry
123903765 CDS
T08949
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123903765
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123903765
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
123903765
NCBI-ProteinID:
XP_045809321
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Position
LG2:18112978..18120410
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AA seq
673 aa
AA seq
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MKMGRAMSKKFQLFLWFRMALQLCFMFGASSEHISFRRSLSNVQSPVTIVINQIQSSPQV
VISNGIFTLTLANPGGYITGISYSGIENVLEGGNEDIDRGYFDVVFGKTFQRVHGTSFTV
ITRNENIAEVSFLRKWQPSDSSSVPINIDQRYIVRKGDSGFYTYVIFDRPTGFPAISVSQ
IRTVFKPKESLFNYMAVSDIIQRKMPEMKDRETGQPLAFPEAVLLTNPSDSQFKGEVDDK
YQYSTENQYNQVNGWITADSEKPVGFWIITPSNEFRNGGPVKQDLTSHVGPICLSMFVST
HYAGKTVAIELKQGEAYKKVFGPIFVYLNTAPSKDKFKSLWTDAKQKLANEVKSWPYNFV
QSKDFIPSNQRGTLSGHLQVKDGANKPQNANNAYIGLALPGPAGSWQSESKGYQFWIRSD
QNGNFLINNIVPGTYNLFAWVPGYIGDYIYKDQITIKPGSKINLNSLVYNPPRNGPTLWE
IGIPDRSAGEFYVPNPYPNLINKLYVNDNKDRYRQYGIWNRYTDLYPKNDLVYKVGVNDW
KKDWFFAHVPRIVGNKTFQATTWSVVFKLDSVVRGNYTLQLALASASNAEVQVWFNKVSA
NPFFTTKRIGDDNAVPRHGIHGLYWLFTIEVPSINLVKGINTVYLRQPRFQSLFQAVLYD
YIRLESPPTTLNV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgggacgtgccatgagtaaaaagtttcaattgtttttgtggtttagaatggct
ttgcaactatgtttcatgtttggtgcctcttctgagcatatatctttcagaagaagctta
agtaatgttcaatctccagtcaccattgtgattaatcaaattcaaagttctccacaggtg
gtgattagcaatggcatctttaccctcacattggcaaatcctggggggtatatcacagga
atatcatattctggaattgaaaatgtacttgaaggtggaaatgaagatattgatagaggg
tactttgacgttgtttttggcaaaacttttcaaagagttcacgggacaagtttcaccgtc
ataacaaggaatgagaatatagcagaggtttcatttttaaggaaatggcaaccctcagac
agttcaagtgtccctataaacatagaccaaaggtacatagtacgaaaaggcgattcagga
ttttatacttacgtgatatttgatcgaccaacaggatttcctgctatctcagttagtcaa
ataaggaccgtttttaagcccaaagaaagcttgttcaactatatggccgtatcagatatt
atacaaagaaaaatgccagaaatgaaagatagagaaactggtcaacctttagcatttcct
gaagcagtgctcttaacaaatccatctgattcacaatttaaaggagaagtggatgataaa
taccaatactcaactgagaaccaatacaaccaagtaaatggatggattactgcagattct
gaaaagcccgtgggcttctggatcataacaccaagtaatgagttccgaaatggtgggcct
gttaagcaagacctcacatctcatgtcggcccaatttgcctctctatgtttgtgagcact
cactatgctggcaaaacggtagctatagaattgaaacaaggagaagcttataaaaaggtc
tttggccctatttttgtttacttgaatactgcaccaagtaaggataaattcaaatctcta
tggacagatgctaaacaaaagctagcaaatgaagtcaaaagttggccttataatttcgtt
caatcaaaagatttcattccatctaatcaacggggaactctatcgggacatttacaagtc
aaagacggggcaaacaaacctcaaaatgctaacaatgcttacatcggtctagcattgcct
ggacctgcaggatcatggcagagtgaaagcaagggttatcaattttggatccgatcagat
caaaatggaaactttcttataaataatattgtacctgggacatacaacttatttgcatgg
gttcctggctacattggagattatatttataaagatcaaattacaattaaaccaggaagc
aaaatcaacttgaattcacttgtatataatcctccaagaaatggcccaactctttgggaa
attggcattccagatcgttcagccggcgaattttatgtaccaaacccttaccctaacctc
ataaacaaattatacgtgaacgacaacaaagacaggtataggcaatacgggatatggaat
cgttacaccgatttatatcccaaaaacgatcttgtttacaaggttggtgttaatgactgg
aaaaaggattggttttttgctcatgttccaaggattgtaggaaataaaacattccaagca
actacatggagtgttgtatttaaacttgatagtgtagtgcgcggaaactatacattacaa
ttggcccttgctagtgcctctaatgctgaagttcaggtttggttcaataaggtgagcgct
aatcctttcttcacgacaaagcgaataggtgatgacaacgcggtaccaaggcatggaatt
catggattatattggttgtttaccatagaagtacctagtattaatttggtgaaaggaatt
aatacggtatatttgagacaaccaagatttcaatcattatttcaagcagttctatacgat
tatatccgtttagagagtccaccaactaccttaaatgtttga
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