Trifolium pratense (red clover): 123904004
Help
Entry
123904004 CDS
T08949
Name
(RefSeq) HEAT repeat-containing protein 6 isoform X1
KO
K24815
HEAT repeat-containing protein 6
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
123904004
Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
123904004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4042
HEAT
HEAT_2
IFRD
Motif
Other DBs
NCBI-GeneID:
123904004
NCBI-ProteinID:
XP_045809658
LinkDB
All DBs
Position
LG2:70395925..70442281
Genome browser
AA seq
1191 aa
AA seq
DB search
MAATGFGGAIAPTPLVRSWRTSFLTLRDETLTNLPRTSTPQLLNNLIFSHSHTLLCAAPE
LPSHEVLSDILFMMELVASTSSDQDECIHIYTQTSRLIHDICRHVKFEINSSSFSSVLGC
FRKMLVRFLGKNATGNELTGIWRTTAIVSAVECLHAIRCIITQSHRRWLQSEDTILVKFL
VDVIVSFQGVSFLMPHSVYKERPAVVNMSFSTESSSSELQTIAFEMLSEAISRAGSSFPV
DIWRSMLEVVRKTMDVMALKTPVVEDNAMSRFYESFLSCLHLILTDPKCSVSDHVSVFVA
VLRMFLNYGLSGRTPITLLVGHSKKDLNNVSPKAHREQLNKSDHSVYRPPHLRKRDCSNM
NPNRATNSQYISDSESSTINVTSSDSDFSDGDGSAKESARGQNSRVRVAAIICIQDLCQA
DSKSFSMQWSLLLPTSDALQPRMRDATLMSCLLFDPCLKARMASASTLVAMLDGPSSSFL
QVAEYKESSKVGSFTALSSSLGQILLEIHRGILYLIQHEAHGKLLALLLKIIRLLVLHTP
YSRMPPNLLPTVITSLRTRIKEGFRYKNDQNNLLDAAVGCLTLALSTSPSSAQVRKMLYD
EVSSGYLENEKKSGVLSLLFEYSSQGSCPSICLEALQALKAVSHNYPSIVTAYWELVSAT
VYGFLSSTVCPEVPSKQSSEHVGGTTALINEKVLITAIKVLDECLRAVSGFQGTEDLSDD
KMVDVPFTSDCIRMKKVSSAPSYELECKDHDVVNSEECESGIKQWCEAMEKHMPLILGHS
YAMVRAASVTCFAGITSSVFISFPKEKQDFILSSLVHAAVHDNASSVRSASCRAIGVISC
FPQVCQSAEVLDKFIHAVEINTRDALISVRITASWALANICDAIRHCVRILHFGQMDSNS
NPQFIVSLSECALRLTEDGDKVKSNAVRALGYISQIFNCSMSRSQEVSVQNLNQRTEAPL
TSENPLTCQRRCLLDSLEDFHRLEKIVQAFISCITTGNVKVQWNVCHALGNLFLNETLRL
QDMDWAPVVFGILLQLLHNSSNFKIRIQAAAALAVPLSVQDYGRSFPDIVRSIEHIMENI
DQDPISGPSNFKYRVSLHKQLTLTMLHVLRYTSSTNDQLLKDFLVKKASFLEDWLNGLCS
SVGRMIDVPDKSVADRKKAMISSAIQSLIEVYKDKQQYAIMQKFEELKNNI
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacgggtttcggtggcgcaatcgcaccgacgccactggttagatcgtggaga
acctccttcttgacgctgagagatgaaaccctaacgaatcttcctcgcacttccacacct
caattgctcaacaatctcattttctctcattctcatactttgttatgtgccgcaccggaa
cttccttctcacgaggttttatcggacattttgtttatgatggaattggttgcatctact
tcttcagatcaagatgagtgtattcatatatatactcagacatcacgtttgatccatgat
atatgtcggcatgttaagtttgagataaatagctcatcttttagtagtgttctcggttgt
tttcggaagatgctggttcggtttctcggaaaaaatgcaaccggtaatgagttaactgga
atttggagaaccacagcaatagtttctgctgttgaatgcttgcatgctattagatgtatc
attactcaatcgcatcgaagatggttgcagtctgaagatactatattagttaaatttcta
gttgatgttattgttagctttcaaggtgtgtcatttttgatgcctcattcagtatacaaa
gaaagaccagctgtggttaatatgagtttttccacagaaagcagttcaagtgagctacag
acaatagcttttgagatgctcagcgaagcaatctcaagagctgggtcatccttccccgtt
gatatctggagatcaatgcttgaggtagtcagaaaaacaatggatgtcatggcattaaaa
accccagttgtggaagataatgcaatgtccaggttttatgaatctttcctgagctgtttg
catctgattcttactgatcctaaatgttcagtatctgatcatgtctcagtttttgttgct
gtgttgcgaatgttcttaaattatggactttctggtagaaccccaattactttgcttgtt
gggcattccaagaaggatcttaataatgtaagtcctaaggctcatagggagcaactgaac
aagtcagatcatagtgtatataggcctccacacttgcgcaaaagggactgctcaaatatg
aatcccaatagagctacgaattctcaatatatctctgatagtgaatcttctactatcaat
gttacatcttcagattcagattttagtgatggagatggatcagctaaagagagtgctaga
gggcagaactctagggttagagttgctgctataatttgcatacaggatctttgtcaagct
gattctaaatctttctcgatgcaatggtccttgcttttgccaaccagtgacgcactacaa
ccaaggatgcgggatgcaactttaatgtcttgcctgctatttgatccctgtttgaaggcc
cgtatggcatctgcatcaactctagtggccatgttggatggtccttcttccagtttcctg
caagtagcagaatacaaagaatctagcaaagttggatctttcactgcactttcaagctct
cttgggcaaattttactcgaaattcatagaggtattctttacttgatacagcatgaagct
catggcaaattgctcgcattgttgctcaaaattatcaggcttttggtattacatacacca
tattcgagaatgccaccaaatttgttgcctactgttattacttctcttagaacaaggatt
aaagaagggtttcggtacaaaaatgaccagaataatctgctggatgctgcagttggttgt
ttgacattagctctgtctacctcaccatcctctgctcaagtaaggaagatgctctatgat
gaggtttcctcaggttatcttgagaatgaaaagaagtcgggtgttctttctttgttattt
gaatattcatcgcaaggaagttgcccaagcatttgccttgaagcccttcaggcacttaaa
gctgtatcccacaattaccctagcatagtgactgcatattgggaactagtttctgcaact
gtatatggttttcttagtagtactgtttgtcccgaagttccttcaaagcagtcaagtgaa
catgttgggggtacaactgcacttattaacgaaaaagttcttatcactgctattaaggtt
ctagacgagtgtcttcgggctgtgtctggatttcaaggaacagaggatctttcagatgat
aaaatggtggatgttccttttacatccgattgcattaggatgaagaaagtttcatctgct
ccatcttacgaactagagtgcaaagatcatgatgtagttaactctgaagaatgtgaatct
ggaattaagcaatggtgcgaggcaatggagaagcatatgcctcttatcttaggtcactct
tatgcaatggtgagggctgcgtctgttacgtgttttgcgggtatcacttcttctgtgttc
atctctttcccaaaggagaagcaggacttcattttgtcttctttagtccatgctgctgta
catgataatgcatcatcagtgaggtctgcttcctgtcgagccattggtgtcatttcatgt
tttccacaagtgtgtcagagtgcagaggtacttgacaagtttattcatgctgttgagata
aacactagagatgccctaatctcagtgaggataacggcttcatgggcattggcaaatata
tgtgatgctattcgtcactgtgttagaattcttcactttggacagatggattcaaactcc
aacccccagtttattgtatcattgagcgagtgtgctttgcgtcttacagaggatggggat
aaggttaaatctaatgctgtgagggctcttgggtatatttcacaaatcttcaattgttca
atgtcaagatctcaagaagtgtctgtgcaaaaccttaaccagaggactgaggcccctctc
actagcgagaatcctttgacgtgtcaacggcgttgcctattggattcccttgaagatttt
cataggctggaaaaaatagttcaggcatttatttcctgcattactacagggaatgttaag
gtccagtggaatgtttgtcatgctctaggaaatctattcttgaatgagacattaaggctg
caggacatggattgggctccggtcgtgtttggcattcttctgcagctactgcataattcg
tcaaattttaagatcaggatacaagctgctgcagcattggctgtgcctttgtcagttcaa
gattatggacgatccttccccgacattgtgcgatccatagagcatataatggagaatata
gatcaggacccaatttctgggccttcgaatttcaagtatagggtttcattacataaacag
cttaccttgacaatgttacatgttctacgctatacatcaagtacaaatgatcaattgtta
aaagatttcctagtgaagaaagcatcctttctcgaagattggctcaatggtctatgctca
tctgttgggaggatgattgatgttccagataaatctgttgcagaccgaaagaaagcaatg
atatccagcgcaatacaatcattgatagaagtatacaaagataaacaacagtatgcaatc
atgcaaaagtttgaggagttgaagaacaacatataa
DBGET
integrated database retrieval system
