Trifolium pratense (red clover): 123904108
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Entry
123904108 CDS
T08949
Name
(RefSeq) peroxisome biogenesis protein 12-like
KO
K13345
peroxin-12
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123904108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123904108
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
123904108
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
PRIMA1
Motif
Other DBs
NCBI-GeneID:
123904108
NCBI-ProteinID:
XP_045809969
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Position
LG1:477022..481726
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AA seq
384 aa
AA seq
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MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRRPFLHKLLDYEDESFSLLM
LVLEAHSLRTTDASFSESLYGLRRRPANIKINNNDDTLTATTTSQLRRRQKLLSLLFLVV
LPYLKSKLHSIYNKEREARIQATLWGDENESYDFQQDSLLSTSALDSRASVTTRITKRFQ
KIVGFCYPLLHAGTEGFQFAYQMLYLLDATGYYSLALHALGINVCRATGQELMDASSRIS
KIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMS
APTVYPPPPPPPPPKVAKEGVQLPPDRTICPLCLQKRVNPSVITVSGFVFCYACIFKFVT
QYKRCPATMAPATVDQIRRLFHDV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtgggaggacaaggaagccggccgacgttcttcgagatggcggcggcc
gaacagcttccacggagtctccgcgccgctctgacatactcaatcggcgtattagcatta
cgaagacccttccttcataaattattagattacgaagatgaatctttctcattactcatg
ctcgttctcgaagctcatagcttaagaaccacagatgcttctttttctgaatctctctac
ggtctccgaagaagacctgcaaatatcaaaatcaataacaacgatgatactcttactgct
actactacttcacagttacggaggcgccaaaagcttctttctcttctctttttggttgtg
ttgccgtatttgaaatccaagttgcattcaatctacaataaagaaagggaagcaaggatt
caggctactctttggggagatgaaaacgaatcatatgattttcaacaggattctttgttg
tccacgtcagccttggattcacgtgcctctgttacaacacgcatcacaaagagatttcag
aaaattgttggattttgttaccccttgttacatgctggtactgagggcttccaattcgca
taccagatgttatacctattggatgctactggatactactcactagcgctgcacgcactt
gggattaatgtgtgccgagctactgggcaagagctgatggatgcctcttctagaatttct
aagatacgtagccgtgaacgtgagagactccgtggtcctcaatggataaagacattgcag
ggagcattgctcagttgtacatacactgtacttgactatgcgcaaaccggtttgattgca
gcagtgttcttctttaaaatgatggaatggtggtatcagtctgctgaggaaagaatgtca
gctccaactgtatatcctcctccccctcctccccctccaccgaaggtagccaaagaaggg
gtacagttaccgccagacagaacaatttgccccttgtgcttgcagaaacgcgtaaatcca
tctgtaattacagtttcaggcttcgtcttctgctatgcttgtatattcaagtttgttact
cagtataagcgctgcccagcaacgatggcgcctgcaacagttgaccagataaggagactc
tttcatgatgtatag
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