KEGG   Trifolium pratense (red clover): 123904412
Entry
123904412         CDS       T08949                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123904412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpra04121]
    123904412
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123904412
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     123904412
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123904412
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd HTH_IclR
Other DBs
NCBI-GeneID: 123904412
NCBI-ProteinID: XP_045810038
LinkDB
Position
LG2:23366952..23369824
AA seq 733 aa
MSNKRKRNFQFRFVPDAETEYFDKNWNILEHAIRDIYKKGNYSHHSIEDLYRYAFNMVLH
KSSDKLYSGLVATMKSMTSHLKEIAESIEATQGGPFLVKLNRKWNDHSKALLMIGDILMY
MDRIYVPRTKKAPVYELGMNLWTETVIYSNQIRTRLSNTLSELICRERDGEDVNRKLIKN
ITKMLMDLGLSVYVQVFETPFLQVSSEFYRAESQKLIECCNCVDYLKNVERLINEEMDRV
NHYLDPRIKSKITYVVKKEMIENHILRLIHMENSGLVNMLCGDKYEDLGIMYNLFSCEID
GLSKICEVMTSHIRESGKQLVTDPEKSKDPVQFVQRLLDEKNKYDKIISLAFNNDKMFHN
AVNSSFEFFINLNPRCPEYISLFVDNKLRKVLKGVSKDDVDITLDNVVMLFRYLQDKDMF
EKYYIQHLAKRLLSGKSVSDDAEKSLIVKLKTECVHQFTSKVEVIFADMKTSVDTMQNFY
ASHSELVDGPTLTVKVLTTRFWPTQSTVTCKLPAEISALCEKFRSYYLGTHAGRKLSWQT
KMGTADLKATFRKGKRHELIVSTYQMCVLILFNNADRLSYKEIEQATEIPASDLKRCLQS
LALVKGKNVLKKEPMSKDFSEDDVFFVNDKFSSKLYKVKIGTFVAAKESELEKVETQQRI
EEHWKPQIDAAIVRIMKSRKQLDHNHLIAEVTKQLQSRFLANPIEVKKRIESLIERDFLE
RDEIDRELYRYIT
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtaacaagaggaagagaaattttcagtttcggtttgtacctgatgcagaaacagaa
tattttgacaagaattggaacattctagaacatgcaattcgtgatatatataaaaaaggc
aactacagccatcatagtattgaagacctctacagatatgctttcaatatggttcttcac
aaatctagtgacaagctatactctgggctggttgccaccatgaagtccatgacttctcat
ctcaaagagatagctgaatctattgaagcaactcaaggaggtccctttttggtaaaatta
aacagaaaatggaatgatcatagtaaggcattactaatgattggagacattcttatgtac
atggataggatttatgttccaagaaccaagaaggcgccggtttatgaacttggcatgaac
ctgtggacagaaactgttatttattcaaaccagataaggactcgactgtcgaatacactt
tcggaattaatatgtagggagcgtgatggggaagatgttaatagaaaactgattaaaaat
ataacaaagatgttaatggatttaggtctttctgtttatgtacaagtatttgagactccg
tttttacaagtttcatctgagttctacagggccgaatctcagaaacttattgagtgttgt
aattgcgtggattatctcaagaatgttgagaggctcataaatgaggaaatggatagagtg
aaccattacttggaccctaggattaaatcgaagattacttatgtcgtgaaaaaggagatg
attgaaaatcatattcttagattaatccatatggagaactctgggttagtcaacatgctt
tgtggcgataaatatgaagatttgggaataatgtataacttgttcagttgtgaaattgat
ggtctctcaaaaatatgtgaagtgatgacttcacacatcagagaatcaggtaaacagctt
gttactgatccagaaaagtcgaaggatcctgttcaatttgtgcagaggctcttagatgag
aaaaataaatacgacaagattataagtttagcatttaataatgataagatgttccataat
gctgtgaattcctcatttgaatttttcattaacttgaatcctcgttgtccagagtacatt
tcgctatttgtcgacaataaacttcgaaaggttctaaagggagtaagcaaggatgatgta
gatattactcttgacaatgtggtgatgttattccggtacttgcaagataaagacatgttc
gagaagtattacatacaacatcttgcaaagaggcttttgtctggaaaatcagtttctgat
gatgccgagaagagtctcatagttaagctaaagacagaatgtgtacaccaatttacctca
aaagtagaggtcatatttgcagacatgaaaacatctgtagacacaatgcagaacttttat
gctagccattccgagttagttgacggtcctacacttactgtaaaggtcctcacaacaagg
ttttggccaacgcaatctactgtgacatgtaaactgccggcagaaatttcggcactttgc
gagaaatttcggtcatattacctcggcactcatgctggtaggaaattgtcttggcaaact
aaaatgggcacagcagacttgaaagctacctttaggaaaggtaagagacatgagttaatt
gtctccacttaccaaatgtgtgtactcatactgtttaataatgccgatagactaagctac
aaggaaattgagcaagcaactgagattccagcttcggatttgaagaggtgtctgcaatct
ttggctttggttaaggggaaaaatgttcttaagaaggaacctatgagtaaagattttagt
gaggatgatgtattctttgttaatgacaagttcagtagtaaactgtataaggtaaaaata
ggaacttttgttgcagcgaaggaatcggaactggagaaagtggaaactcaacaaagaata
gaagagcactggaagccacaaattgatgcagcaatagtgaggattatgaaatctaggaag
caacttgatcataaccatcttatagctgaggtcacaaagcagttgcagtcacgattcctc
gcaaatccaattgaggtaaaaaaacggattgagtctctcattgagcgggactttttggag
agagatgaaattgatagagaattgtatcgatatattacctag

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