Trifolium pratense (red clover): 123904486
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Entry
123904486 CDS
T08949
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123904486
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
123904486
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PsaA_PsaB
Motif
Other DBs
NCBI-GeneID:
123904486
NCBI-ProteinID:
XP_045810103
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Position
LG2:complement(27242135..27243992)
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AA seq
395 aa
AA seq
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MAAKVLFALSLLLVFIAESQATKVKNFFNVMNYGATADGKTDNSAAFMKAWSDACNSNGK
VAVMIPRGTYFVKQVIFKGPCKGLTIVRIEGDLIAPSDPFFAKDTWINFRYVKNLIVSGP
GRLDGQGSSAWEDCTKNHNCRPSLPISMTFDFVTNGYIHHLSSINSKGGHFKTYGCENMT
FKKVKISAPGDSPNTDGIKIANSNGIAIDRVNIGTGDDCIAIISGSKNVSISDVFCGPGH
GISVGSLGHNDWEQNVENIKVKNCTLSDTTNGLRIKSWATPLSKPLKVSNFVYEDIVMNN
VYNPIIIDQEYCPSGTCSNKDASHVEISDVSFKNIRGSSNTQVAVNLKCSAKFPCKNIIL
DTIDLWQNRGVGRLSNLCSNVNGASYGKQNPSSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagttttgtttgcgttgagcttactactagttttcattgcagagtcacaa
gctactaaagtcaagaatttttttaatgtcatgaattatggtgcaaccgctgatggcaaa
acagataacagcgcggcttttatgaaagcatggagtgatgcttgtaattctaatggaaaa
gtcgcagtgatgatcccacgaggaacttattttgtcaaacaagttatcttcaaaggacct
tgcaaaggattgactattgtcagaattgaaggtgatttgattgcacctagtgatccattt
ttcgcgaaagacacatggatcaattttcggtacgtcaagaatttgatcgtcagcggaccg
ggaagattggacggtcaaggatcgtccgcttgggaggattgcactaaaaaccacaattgt
cgtcctagtcttcccatctcgatgacatttgactttgtgacaaatggttacattcatcac
ttgagttcaattaacagcaaagggggacatttcaagacatatgggtgtgagaatatgaca
ttcaagaaagttaaaatttcagctccaggtgatagtccaaacacggatggaataaagata
gcaaactctaatgggatagctatcgaccgtgtaaatattggcactggtgatgattgtatt
gctataatctccggcagcaaaaatgtttcgatttctgacgttttctgtggtcctggtcac
ggaattagtgttggaagtctcggtcataatgactgggaacaaaatgtggaaaacattaaa
gtcaagaactgcactcttagtgacactactaatggattaagaattaaatcatgggctact
ccattgagcaaacctttgaaggtgtctaattttgtgtatgaggatattgtgatgaataat
gtgtataatcccattattattgatcaagaatattgtcctagtggtacttgcagcaataag
gatgcttcacacgtggaaataagtgacgtgtcattcaagaatattcgtggaagttccaat
acccaagttgcagtcaatttgaaatgcagtgcaaaatttccatgcaaaaacattatattg
gatacaattgatttgtggcaaaatcgtggtgtaggaagactaagcaatttgtgttcaaat
gttaatggtgcttcttatggcaaacaaaatccttcatcttgcctatag
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