Trifolium pratense (red clover): 123904813
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Entry
123904813 CDS
T08949
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123904813
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123904813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
123904813
NCBI-ProteinID:
XP_045810380
LinkDB
All DBs
Position
LG2:47285702..47290254
Genome browser
AA seq
755 aa
AA seq
DB search
MEANGEMGLIGENFDSGLMGRMRDDDFESRSGSENFDASGDEFDAGDDHQQNKRKKKYHR
HTPQQIQELENFFKECPHPDEKQRADLSKKLGLENKQVKFWFQNRRTQMKTQLERHENMI
LRQENEKLRAENSVMKEAMANPICSNCGGPAIPGQISMEEHQIRIENARLKEELARVCTL
SNKFLGRPVSALTGMSMQNPNAGFEFGMGRNGIVGPSNFNMSLPMGFDMGDGVMGAPPSN
SVMRSPMGMIGNDAQQERAVLIEIALAAMDELIKMTEPDTHLWIKSPDNGKEMLNHDEYA
RIGSPFNSPKPNGFVTEATRETGLLYTNSAALAEIFMDADRWSEMFPCMIAHAATLDVLT
NGMGGTRNGSMQVMHAEIQLPSPFVPVRQYRFLRFCKQHAEGVWAVVDASIDFGRNGPNG
NPYMSSKKLPSGCILQDMSNGFCKITYVDHSQYDESAVHQIFRPMVNSGIAFGAHRWVAT
LQRHCESLAILMSPVSSDESAVMSPQGKRSMSKLAQRMTDYFWSGVCPSSACKWDMLHIN
NMGTSDVRIMSRKISDPSGENHSIVLSAATSVWMPLSRQRVFDFLRDARLRGEWDVLSGG
GSMQEMVHIATGQAIGNSVSILGANTVSALFSIMLYLQDSWTDSSGSMIVYSPINMDSLS
LVMSGGDSSSVALSPSGFSILPDGHSSNNNIVGTSSDGSSSSGSDNDNGGCLLTAGLQMV
LTNVQSSKLTNDSVDTINDLIACTVQKIKDALGVA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaatggtgagatgggactaattggagaaaattttgattctggtttgatgggt
aggatgagggatgatgattttgaaagtaggtctggaagtgaaaattttgatgcttctggt
gatgaatttgatgctggtgatgatcatcaacaaaacaagaggaagaagaagtatcataga
cacactcctcaacaaattcaagagctcgaaaatttcttcaaggagtgtcctcatcctgat
gagaagcagcgcgctgatcttagcaagaagcttggcttggagaacaagcaagtcaaattt
tggtttcagaatcgacgaacccaaatgaagacgcaattggaacgtcatgagaacatgatt
cttaggcaggaaaatgagaagctccgagctgagaacagtgtgatgaaggaagctatggca
aatccaatatgcagcaactgtggcggcccggcaattcctggacaaatttcaatggaggaa
catcagattagaattgagaatgctcgactgaaggaggaattggctcgagtgtgtaccttg
tccaacaagttcctaggccgtccagtctctgcattgactggaatgtctatgcagaatccg
aatgcaggttttgaatttggtatgggaaggaatggaattgttggtccgagcaatttcaac
atgtcgctgccaatgggatttgacatgggagatggagttatgggagctccaccgtcaaat
tctgtaatgcgatcaccaatgggaatgatcggaaatgatgcccagcaggagagagctgtg
cttattgaaatcgcattagctgctatggatgagctaatcaaaatgaccgaacctgacacc
cacctctggattaagagtccagacaacgggaaggaaatgctgaaccatgacgagtatgca
aggattggttctccttttaacagtccaaaaccaaatggttttgtaactgaagctacaaga
gaaactgggctgttatacaccaacagtgccgctctcgcggaaatattcatggatgcggat
cggtggtcggagatgtttccatgtatgattgctcatgctgcaaccttggatgtattaact
aatggaatgggtggaaccagaaatggatctatgcaagtgatgcatgcagagattcaattg
ccttctccatttgtcccggttcggcaatatagattcctcaggttttgcaagcagcatgct
gaaggtgtttgggctgtagttgatgcttccatcgactttggtcggaatggtcccaacggt
aacccttacatgagcagtaagaagcttccatctggctgtattttgcaggacatgtccaat
ggtttttgcaagattacttatgtggatcattctcaatatgatgagagtgctgtccaccaa
atctttcgtccaatggttaactccggtatcgcatttggtgctcatagatgggttgcaact
ctccagaggcactgtgaatcccttgctatcctcatgtcacccgtatcatctgatgaatct
gcagtcatgagcccacagggcaagagaagcatgtcaaagctcgcgcagcggatgactgat
tacttctggtctggagtttgtccttcgtcagcttgcaagtgggacatgcttcacattaat
aacatgggcaccagtgacgtgagaatcatgtcccgaaaaatttcggatccctctggtgaa
aatcatagcattgtgctaagtgctgcaacttctgtttggatgccattgtcgcggcaaagg
gtatttgatttcctccgtgatgcacgattgagaggcgagtgggatgttttgtccggtggt
ggatcaatgcaggagatggtccatattgctacgggacaagcaattggaaattccgtttct
atcctcggtgctaatactgtaagtgctcttttttccattatgctatatctgcaagattca
tggactgatagttctggctcaatgattgtgtattctcctatcaacatggattccttgagc
ttggtgatgagcggtggcgattcttcatctgttgctctgtcgccttcgggcttttcaatt
cttccggatggccattcaagtaacaacaacatcgttggaacttcaagtgacggaagtagc
agcagtggaagcgacaatgacaatggcggatgcttgctcacagctggattacaaatggtg
ctgaccaatgttcaatcaagtaagctaacaaacgattccgttgataccattaatgatctc
atcgcatgcaccgttcagaagatcaaagacgctctcggagttgcatga
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