Trifolium pratense (red clover): 123904935
Help
Entry
123904935 CDS
T08949
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00500
Starch and sucrose metabolism
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
123904935
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tpra01003
]
123904935
Enzymes [BR:
tpra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
123904935
Glycosyltransferases [BR:
tpra01003
]
Polysaccharide
Storage polysaccharide
123904935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
MaoC_dehydratas
APG6_N
Motif
Other DBs
NCBI-GeneID:
123904935
NCBI-ProteinID:
XP_045810493
LinkDB
All DBs
Position
LG2:complement(17782211..17795977)
Genome browser
AA seq
675 aa
AA seq
DB search
MPILGFSSHFLFHLPKPISLPPLTCYRNKGDVNSFHEQRLEDNKNDDMSKSLSHDDKNVK
HDNIWQLFKEAQQNILYLNNQRLSAIEELNKTKKEKQSLLDKIKKLEAEKDETADNLSIC
SELLLRIDSMVLGSVINPAEASNFRSLVLSHKLSVADIFNVISHKRDSDLLRELRHFSDQ
SKKNGFHVIHICTEMTPLVSRGSVASYVTGISRALQRKGHLAEVILPKYTCLNLDEVQGL
REVNVEAYSYFNGQLHGNKIWTGVVYGIGITLIEPLDYSSFFSREMIYGYPDDFERFSYF
CRASLDYIVKCGKQPDILHLHNWETAIVGPLFWDIFVNKGLGGTRILLTCHDFNSQGIEK
PNKLALCGLDPSSLHRPDRLQDNTNTQFINILKGGVVYSNRVVIMSSIHPKHSIVRNLSH
ELKPTLNDHEDKLTLAPYGFEKTTWDPSTDYFLPENFNAENINGKAVCKVALLQRLGLSG
HSSIILVGCNFPEGADIDEKKMKDIVLNTKQHVQFIFMETSERPTLNQALESLQKELKDD
DNIKFVRAYDEALLHLLFAGSDIILCQSFLDPTDETPLKALRYGAAPIAIGPEAHTNRVI
SFDRNFIHHDQEATKYSKLINNTFGNMSLDLAIDEIRSNPSKWKRRIMDAMAHDLSWDGE
CYEVHVAAYSAIKNM
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccaattttgggtttttcttctcattttctttttcatcttccaaaacccatttcactt
cctcctcttacttgttacaggaataaaggagatgtcaatagtttccatgaacagaggtta
gaggataataaaaatgatgacatgtcaaagtcattatctcatgatgacaagaatgtgaaa
catgataatatttggcaattgttcaaagaagctcagcagaacatactatacttaaacaat
caacgccttagtgccatcgaggaactcaacaaaacaaagaaagaaaaacagtccctactc
gataagataaagaaattggaagcagaaaaagatgagactgctgataatctatcaatttgt
tccgaattgctgcttcgaatagactcgatggtccttggcagcgtgattaaccctgcagag
gcatctaactttagaagtttggtgttaagccacaaactgagtgtggctgatatctttaat
gtcatctcacataaaagagattctgatcttctccgagaacttcgtcacttttcagatcaa
agcaaaaagaatggttttcatgttattcacatttgcacagaaatgacaccattggtctct
agaggatctgtagcatcatatgtaaccggcatatctcgcgcacttcaaagaaaaggccac
cttgcggaggttatattgcccaagtatacatgtttaaacctagatgaagtgcaagggttg
cgtgaagttaatgtggaggcttactcgtattttaacggtcaattacatggaaacaaaatt
tggaccggtgttgtttatggcattggaatcactttgatcgagccattggactattcatcc
tttttcagccgtgagatgatatatggttacccggatgattttgaaaggttctcttacttt
tgtcgcgcctcactggattatatagtaaaatgtgggaagcagcctgacatactgcattta
cataactgggaaactgccattgttgggccccttttctgggatatatttgttaacaaggga
cttggaggaaccagaatattactgacatgccatgacttcaattcacagggtattgagaaa
ccaaataaattggccttatgtggacttgatccttcgagtcttcatcgccctgaccgtctc
caagacaacactaacacacaatttatcaatattttaaagggtggagttgtctattcaaac
agggttgtcataatgtcatctatccatccaaagcactcaattgttcgtaatttgagtcat
gaactgaaacctactttaaatgatcatgaggacaagttgaccttagctccttatggattt
gagaaaacaacatgggatccttcgacggactattttcttccagaaaattttaatgctgaa
aatataaatggaaaagctgtttgcaaagttgcattgctgcagcggctagggttatctgga
cattcttctattattcttgttggatgcaattttccagaaggagctgatattgatgagaaa
aagatgaaggatatcgttttgaatactaagcagcatgtccagtttatatttatggagacc
agtgaaagaccaaccttgaatcaggcactagaatcacttcagaaggaactcaaggatgat
gataatattaaatttgtgcgtgcatatgatgaagctctattgcatctattattcgcagga
tctgacattatactgtgtcaatcatttcttgatcctacagatgaaacccctctcaaagct
ttaaggtatggagcagctccaatagcaattggccccgaggctcacacaaacagggtgata
tcttttgataggaacttcatacaccatgaccaagaggccactaagtactcaaagttaatc
aacaatacctttggaaacatgtcacttgaccttgccattgatgaaattaggagtaatcca
tcaaagtggaagagaagaataatggacgcaatggcacatgatttatcatgggatggtgaa
tgctatgaagttcatgtggcagcttactcagctataaagaatatgtga
DBGET
integrated database retrieval system
