Trifolium pratense (red clover): 123905055
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Entry
123905055 CDS
T08949
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1 isoform X1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123905055
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
123905055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
BURAN
EF-hand_6
EF-hand_7
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
123905055
NCBI-ProteinID:
XP_045810628
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All DBs
Position
LG2:23975171..23984241
Genome browser
AA seq
1459 aa
AA seq
DB search
MYSSRGSGAYGQSYTGQSAYGQNLSANYSGASVGGHDATPHSAASRHSGVLGSSQDADVG
SYRAHTAVAQYGGQYSSVYGSAAVSTAQQTPSLSTKGAGSSALDARGGYSLGVSDSPKFA
SSDYLSSSSTHGYGHKSDQLYGDKSLDYSGLDRRQYGERQSGYIGRDLSSDPTGRYATDS
VGYSHQHQATLLRQEQLLKSQSLQAASLDGGTRQTDYLAARAAASRHPTQDLMSYGGRID
SEPHASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKG
IHGNAMDLDYPANPLSSDRKDDRASYLRDFELREEERRRDRLRDRDRDRERDKERERLRE
RERDREKEREKERMERREKERERDRKRALEVKLERTPVRSSKDPRSTSKDPRGSSLTKET
KSSRRDSPHRGSLHRHRSPVKEKRREYICKVYPSCLVNIERDYLSIDKRYPRLFISPEFS
KVVVNWPKENLKLSMHTPVSFEHDFVEEEGARDSSSKLLTVQPTSSEQRNTVWNAKVVLM
NGLSRGALEELSSDKLLDDRIPHICNFLRFAILKKDHSFMAVGGPWEPADGGDPSNDDSS
LIRAALRFIPQYHDMIICCKNLCFPLLNNGYFSYFYRYTKDIIQLDLQKCQHWNRFLEIH
YDRIGKDGFFSHKEITVLYVPDLSECLPSLDEWRDQWLAHKKAVAERERQISLKKEKSRA
IKESNDKSDKRKDSAASEKPDVKKKEKDNSTVKEESEKKAGASKKTVAKKDSVDVGEAKS
AEKKPGETTPGQPTGSVKSVKKKIIKKIVKKVVSKTNDSAKKQSEKSGEKVVADKVATSD
VPVDEVKPSVDPTGIQTTGKDIVAADIPVAKTDDEGKNDKEISSLEGKPLEKLDPAVNIG
TKDATVKTIKKKIIKRVPKKKVVDEASKSVVNEENVAAVPAKDGTDSTGKQAADADTIVP
EGKKPAKVVVTKRKLKTPSSGVQDDATDSNKRDTKSDKKDEENAVAAPANDVTQSTGKQA
TDADTKIAPVVKKKIVKVVPKKKLKVDTSEKPEGAGDSNKNEKKSDNEDKKDGKATEEKS
GSKIAKQKTSEKDTQIVKGKLKVGDKSKDEKVTKEKDGKDEPKSKSSKEVKEKRKSDEPP
RHPGLILKTKSTKDSKLRSLSLSLDSLLDYTDKDVEESTLELSLFAESFYEMLQFQMGSR
ILNFLQKLREKFVIKRAQRKRQREEEPDKDSANKTPTKRQKGDDPSVKSETKVDTSNPTQ
ADNDKTVAENDNSSNKEEDVKMENASDEEVEPEEEDPEEDPEEEMENDSPQHDSSNDNNA
EQEADAKNESENVASNEKPADETSKGEIKVKDEVKESKDDVQLNDEKESKVKKDNTVKKE
TPAVKEAVVDKELLKAFRFFDRNRVGYIRVEDMRIIIHNLGMFLSHRDVKELVQSALLES
NTGRDDRILYIKLARMSDV
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgtattcttccagagggagtggcgcttacggccaatcctacactggtcaatctgcatat
ggtcaaaacttgagtgctaattattctggggcatctgttggaggacatgatgctaccccg
cattctgcggcttcaaggcattcgggtgtattaggtagttctcaggatgctgatgttggt
agttatagggctcatactgctgttgctcagtatggaggacagtatagttctgtttacggt
tcggcggctgtgagtaccgcacagcagactccgtctttgagtaccaagggagctgggtca
tcagctttagatgctcgtgggggctactcattgggtgtttcagattcacctaagtttgct
tctagtgactatttatcatcgtcctcaacccacgggtatggtcacaaatctgatcaattg
tacggtgacaagagtttggattattctggattagatagaaggcaatatggtgaacgtcag
agtggttacattggtagggatttatcaagtgatccaactggacgatatgctactgattct
gttggatatagtcatcaacatcaggccactttgcttcgacaagagcaattgctgaaatct
cagtccctgcaagctgcctcactggatgggggtacaagacaaactgattatcttgcagct
agggctgctgcaagtcgtcacccaacccaagatctcatgtcttatggaggaaggattgat
tctgagccccatgcttcatcaatgttaagtgctacttcatatagtggacaacatgcacca
tcgatattaggagcagcaccaaggagaaatgtggatgatcttttgtattcccagaatgca
tcaaatcctggttatggagtgagcttgccacccggtagggactatgccagtggaaaaggt
atacatggaaatgcaatggatttggattacccagcaaatccgctgtcttctgataggaag
gatgaccgggctagctatcttcgagattttgaactaagggaagaagaacgacgccgggac
cgcttgcgtgatagagatagggacagagaaagggacaaagaacgagaacgattgcgagaa
cgggaacgagatcgagaaaaggaacgcgaaaaggagcgcatggagcggcgtgaaaaggag
agggagcgtgatcgcaaacgtgcacttgaagttaagcttgaacgaactccagtgagatcc
tccaaggatccccgtagtacttcaaaggatcctcgcgggtcgtctttgacaaaggagacg
aaatcttcacgacgggactccccacatcgtggctctttacataggcaccgttcaccggtt
aaagaaaaacggagagaatatatctgcaaggtttacccttcttgtttggtaaatattgag
agggattatctctcaatcgacaagcgatacccgcgactcttcatctcgcccgaattttcc
aaggttgttgtgaactggccgaaggaaaaccttaaactctctatgcatactcctgtcagt
tttgagcatgattttgttgaagaagaaggtgctagagactcatccagtaagcttttgaca
gttcaacctacaagttcagaacagagaaatacagtttggaatgcaaaagtagttttgatg
aatgggcttagtaggggtgcattggaggagctgtcatcagataaacttcttgatgaccgc
attcctcatatttgcaatttccttaggtttgcgatccttaagaaggatcattctttcatg
gcagttggtggtccatgggaacctgctgatggtggtgatccatctaatgatgatagctct
ttgatcagagcagcccttaggtttatacctcaatatcatgatatgataatttgctgcaaa
aacttatgctttcccttactgaataatggatatttttcctacttttacagatacacaaag
gatatcattcagcttgatttgcagaagtgtcaacactggaatcgattccttgagatacat
tatgatagaatcggtaaagatggtttcttcagccacaaggaaattactgtactttatgtt
cctgatttgtctgagtgcctcccttcattggatgaatggcgtgatcagtggcttgcccac
aagaaagcagtggctgaaagagaacgtcaaatttctctaaagaaagagaaatcaagggct
atcaaggaatcaaatgacaaatcagataagaggaaggattctgctgcatctgaaaaacca
gatgttaagaaaaaggagaaagataatagtactgttaaggaagagagtgaaaaaaaagct
ggagcgagtaaaaagacagttgctaaaaaggattccgtagatgtaggtgaagccaagagt
gccgagaaaaagccaggcgaaactacccccggtcaacccacaggaagtgtgaagtctgtg
aagaagaaaattataaagaagattgtgaaaaaagttgtcagtaagacaaatgatagtgca
aagaaacaaagtgagaaatctggtgagaaggttgttgcagacaaagtggccacatcagat
gttcctgttgatgaagtcaagccttctgtggatcctactgggattcaaactactgggaaa
gacatagttgcggcagatattccagttgcgaaaactgacgatgaagggaaaaatgacaag
gaaataagcagtttggaaggtaagcctctggagaaactggatccagcagttaatataggt
accaaggatgctactgtgaaaactataaaaaagaaaattatcaagcgggtacctaaaaag
aaggtggttgatgaggcgtctaaatctgtagtaaatgaagagaatgttgcagcagttcca
gcaaaggatggtactgacagcactggcaagcaggctgctgatgcagacaccatagtgcct
gagggcaagaaacctgcaaaggtagtagtaaccaagagaaagttaaaaacaccatcctct
ggggtgcaagatgatgcaactgattccaataaaagagacaccaagtctgataaaaaggat
gaagagaatgccgtggcagctcctgcaaatgatgttacacagagcactggcaagcaggct
actgatgcagacacaaaaattgcaccagtggtaaaaaagaaaattgtgaaggtagttcct
aagaaaaagttaaaggtagacacctccgagaagccagaaggtgcaggtgattccaataaa
aatgaaaagaagtctgacaatgaagacaagaaggatggaaaagcaactgaagaaaaaagt
ggatccaagatagctaaacagaaaacctctgagaaagatactcaaattgtcaaggggaaa
ctgaaagttggggataaatcaaaagatgagaaagtaacaaaagagaaagatggaaaagat
gagcctaaaagcaaatctagtaaagaagtgaaagagaagaggaagtctgatgaacctcct
cggcaccctggacttattctaaaaacaaaatcgacaaaagattctaaactacggtcattg
tcactgtctcttgattcattgttggattatactgacaaagatgttgaagaatcaacactt
gagctttcattgttcgccgaatcattttatgaaatgcttcagtttcaaatgggtagtagg
attttgaattttcttcagaaactgcgtgaaaaatttgtgatcaaaagagctcagcgaaag
aggcagagggaagaggagcctgacaaggatagtgcaaacaagacacccacaaaacgtcaa
aagggtgatgatccttccgttaagagtgagacaaaagtggacacatcaaatccaactcaa
gcagataacgacaaaactgttgccgagaatgataattctagtaataaggaggaggatgtg
aagatggaaaatgcatcagacgaggaagtagaaccggaagaagaggaccctgaagaggat
ccagaagaggaaatggaaaatgatagtccccaacacgactcatccaatgataataacgct
gagcaagaggctgatgcaaaaaatgaatctgaaaatgttgctagcaatgaaaaaccagca
gatgaaacttctaaaggggaaataaaggttaaagatgaggtgaaagagtccaaagacgat
gttcaactcaatgatgaaaaggaaagcaaggttaagaaagacaatacagttaagaaagaa
acccctgctgttaaggaagctgttgtggacaaagaattgttgaaggcttttcgatttttt
gatcggaatcgtgttggctacattagggttgaagatatgagaataataatccacaatcta
gggatgttcctttctcacagggatgtgaaggagcttgtacaaagtgcattgttggagagc
aacactgggagggacgatcggatactttatatcaagttggcgcggatgagtgacgtttga
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