Trifolium pratense (red clover): 123905156
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Entry
123905156 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123905156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123905156
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123905156
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
123905156
NCBI-ProteinID:
XP_045810746
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Position
LG2:complement(61139764..61143017)
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AA seq
686 aa
AA seq
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MNRSDLQQFAASSSSHFRNRFPKSFSLRKKVPWWYQILHPRSKFIAQWNLTFLYACLFAL
FLDPLYFYIPITGDKACMQTDLVLGVVVTFLRTVADLFFLFHVVLKFRTAFNSPTSHVYG
RKELISDPTEIARRYLKHDFVIDLLATLPLPQIVIWFIVPATKNSTAAHVNHTLSLIVLI
QYIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVTSIQRQYEC
WRIMCKKEMNRTHSPTCNPDFLDCTSLTNQARQAWFRRTRVLTNCDALNDKNIFQFGMFA
DAFTDHVSSSKFIQKYFYCLWWGLKNLSSYGQNIQTSTYSGETLFCSFICIAGLILFAHL
IGNMQNYLQSSTARLEEWRLRQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEA
ILKSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDSYIVREGDP
VREMLFIIRGSIESSTTDGGRTGFYNSITLKPGDFCGEELLTWALMPASSLSLPSSTRTV
KSITEVEAFALRAEDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKR
QLAMELLEKENLLYDESGGGESSMGMEEDSASHGQNFGATFLASKFAANTRKGAVKKVAI
IPDSSSLKMPKMFKPTEPDFSTFHED
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatcagatttacaacaatttgcagcatcatcttcatctcattttcgtaaccgt
tttccaaaatcattttctcttcgtaagaaagtaccatggtggtaccaaatacttcatcca
cgttcaaagttcattgcacaatggaaccttacattcctctatgcatgtctatttgctctt
tttttggatcctctttatttctatattccgattaccggagacaaagcttgtatgcagacg
gatttggttctcggtgtggttgtcacgttcttgcgtaccgtggctgatctattcttcttg
tttcatgtggttcttaagtttcgtaccgcgttcaattctcctacctctcatgtttatggt
cggaaagaacttattagtgatccgactgagattgcccggagatatctcaagcatgatttt
gttattgatcttctcgccacccttcctttacctcagatcgttatttggtttatagttccg
gctacaaaaaattcaacggcagctcatgtaaaccacacattgtcgctaatcgttctcatt
cagtacattcctagattgtttcagatttttcctttacaacgccgaatcttgaagactagc
gggcttatagcaaaaactgctttggcaggagcattatacaatctcggtttctacatgctc
gccagccatgttttaggagcaacatggtatgtgacttctattcaaagacaatatgaatgt
tggagaataatgtgcaagaaggaaatgaatagaacacattctcctacttgtaatcctgat
tttcttgattgtacttctcttactaaccaagcaagacaagcttggtttcgacgaactcga
gtcctaactaattgtgatgcactcaatgataaaaacatatttcagtttggaatgtttgct
gatgcttttactgatcatgtttcttcctcaaaattcatacaaaaatatttttactgcctt
tggtggggtttgaaaaatctaagttcctatggacaaaacattcaaactagtacttatagt
ggtgaaacattattttgtagtttcatttgcatagcaggacttattctgtttgcacatctc
attggtaacatgcagaattatctgcaatcttcgaccgcaagacttgaagagtggagactt
aggcaaaaagatacagaagaatggatgaatcatcgtcaacttcctccagaactgcaggaa
cgcgttcgtcgctttgttcagtacaaatggcttgccactagaggtgttgacgaagaagcc
attttgaaatccttgcctgttgaccttcgccgccagattcaaaggcatctctgtcttgat
attgttcgccgagtaccttttttcgggcaaatggatgatcaacttctagatgctatatgc
gaacggctagtttcatcattgaacacgaaagactcatatatagttagagaaggtgatcca
gttagagagatgctttttatcatcagaggaagtatagaaagttctacaacagatggtggt
agaacaggattctacaattcaatcacactaaaaccgggcgatttttgtggcgaagaattg
ctaacatgggctttaatgccagcatctagtcttagccttccatcttctacaagaactgta
aagtcaataactgaagttgaagcatttgcacttagagcagaagatctcaaatttgtgtcg
agccaatttaagcgccttcatagcaagaaacttcaacatgctttcagatactattctcat
cagtggagagcttggggggcttcttttatacaagcggcgtggaggcgtcaccgcaagcga
caattggcaatggagttgttggaaaaagagaacttgctttatgatgagagtggtggagga
gaaagttccatgggaatggaagaggatagtgctagccatggacaaaattttggggctaca
tttttggcttcaaaatttgctgctaacactaggaaaggagcagttaaaaaggttgcaata
attcctgatagtagcagtttgaagatgcctaagatgtttaagccaacagagcctgatttc
tcaacatttcacgaagattaa
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