Trifolium pratense (red clover): 123905613
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Entry
123905613 CDS
T08949
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123905613
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123905613
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123905613
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123905613
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
SR proteins
123905613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
123905613
NCBI-ProteinID:
XP_045811247
LinkDB
All DBs
Position
LG2:13588042..13590793
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AA seq
289 aa
AA seq
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MEDSPVRRLSRSPSPWRAQSRSRSRSGSLERRRPTSRSRSPEMQRPRSLSRSPEMQRPRS
LSRSPGMQMHRSRSRSLERQRPPRSRSRSLEMQRPRSPSRSRGRSRSRSPDRNGGDTLYV
TGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSVEDANRCIKYLNQS
VLEGRYITVERSKRKRPRTPTPGHYLGLKNTRDYGPPRGDRGRHRGGFGRDDYPYRGGRD
YSPRRSPYRGGRDYSPRHSPYGGRYRRDRSRSPYAPYGSPDRRYARGPR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctccagtaagaaggctttcaaggtccccttctccatggagggctcaatca
agatccaggtctcggtcgggatcccttgaaaggcgcagacctacgtctcgatcaaggtct
cctgaaatgcaaaggcctaggtctctttcaaggtctcctgaaatgcagaggcctaggtct
ctgtcaaggtctcctggaatgcaaatgcacaggtctcggtcaaggtctctcgaaaggcaa
aggcctcctaggtctcggtcaagatctcttgaaatgcaaaggcctagatccccctcgaga
agtcgtggcagatcaagatcaagaagtcctgataggaatggtggggatacactttatgtg
actggcctatcttcaagggtcactgagagagacctagaggagcatttctctaaggaagga
aaggttgcttcatgttttcttgtggtggagccccgtacgcgtatatctcgaggttttgcg
tttgtcactatggattctgttgaggatgcaaatcgctgtatcaagtacctcaatcaatct
gttttagagggtcgctatatcactgttgagcggtcaaagagaaagcgaccaagaactccc
acgcctgggcactatcttgggctgaaaaatactagagactatggacctccgcgtggtgac
cgtggaaggcatcggggtggatttggccgtgatgattatccatatcgaggtggcagggat
tattcaccaaggcgctcaccttatcgaggtggcagggattattcaccaaggcactctccc
tacggtggaaggtataggagggataggtctaggtcgccttatgctccatatggtagccca
gataggaggtatgctcgtgggcctaggtga
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