Trifolium pratense (red clover): 123905645
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Entry
123905645 CDS
T08949
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123905645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123905645
03051 Proteasome [BR:
tpra03051
]
123905645
Membrane trafficking [BR:
tpra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
123905645
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123905645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
TBK1_ULD
Ubiquitin_2
Dsc3_N
UBX
Rad60-SLD_2
Ddi2_HDD
Ubiquitin_5
UN_NPL4
Elf4
GerD
Motif
Other DBs
NCBI-GeneID:
123905645
NCBI-ProteinID:
XP_045811283
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All DBs
Position
LG2:13891674..13897849
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AA seq
538 aa
AA seq
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MGGDATADTSTEQQSTDGVKINIRCSNGSKFSVQISLDSTVSSFKDVVAQNCDIPADQQR
LIYKGRILKDDQTLQSYGLEADHTVHLVRGFTPANTTAGTNTGGANTTTNARGAGANEGG
GLGGPGLGASLFPGLGGINGMGGGGGLNSLFGAGPPDLEQPFMSNPNLVREIMNSPAMQN
LLNNPEIVRNLLMSNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDR
AMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNTGNESARGLGTQGGQTRNQSTNPST
TSAEATSPVPNTNPLPNPWSSAPTGGAQPNVRRSTTTGADARQQTPTGLGGLGMPDLEGM
LGGMPDAGSLSQLMQNPAISQMMQSILSNPQTMNQILGTNTDQRGMPDLNSMREVMQNPE
FLRMFSSPETMQQLLSMQQALMTQLGQQQSTQEPGQTGGGNVNNLGLEMLSSMFGGLGAG
SLAVPNRSNEPPEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNTGQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgacgcaaccgctgatacttcgacggagcaacaatccaccgacggagttaag
atcaacattcgttgttccaatggttccaaattttccgttcaaattagcctcgattccacc
gttagttccttcaaggatgttgttgctcagaactgtgatatccctgctgatcaacagcgt
ttgatttataagggtcggatccttaaggatgatcaaactcttcaaagctatggtttggag
gcagatcacactgtccatttggttcgtggctttacgcctgcaaatacaactgctgggact
aataccggtggggccaataccacaactaatgctagaggtgctggtgctaatgagggtggg
ggattaggaggacctggacttggagcttcgttgtttccaggtctaggtggtatcaatggg
atgggaggaggaggtggcctcaatagtttatttggagcgggacctccagatcttgaacaa
ccatttatgtcaaatcctaatttagtgagagaaattatgaactcacctgccatgcaaaat
ttattaaataatcccgagatagtgcgcaatcttctaatgagtaacccacagatgcaagag
ctcatggatagaaaccctgagttggcacacatacttaatgatccaagcacacttcgccag
acacttgaggctacaaggaaccccgagatcatgcgtgaaatgatgaggaatacagacaga
gctatgagcaatattgaatcttctcccgagggattcaacatgctgaggcgcatgtatgaa
aatgttcaagaaccatttttaaatgccaccacaatggctggtaacacaggaaatgagagc
gccagaggtttggggactcaaggtgggcaaacgaggaatcaatcaaccaatccctcaact
actagtgctgaagcaacttcccctgtacccaatactaacccacttcctaatccttggtca
tctgctccaactggaggtgcccaacctaatgttaggaggtcaacaactactggtgcggat
gctcggcagcagacgcccactggcttaggcgggcttggtatgccagacctcgaaggcatg
ttgggtggtatgccagatgctggttcattgtcccaattaatgcaaaatccagctatctca
caaatgatgcaaagtatcctttccaatcctcaaacaatgaatcagattcttggtacgaat
actgatcagcgtgggatgcctgatctaaattcaatgagagaagtgatgcaaaacccagag
tttcttcgcatgttttcctcacctgagacaatgcagcaactcttgtctatgcagcaagct
cttatgactcagcttggtcagcagcaatcaacacaggaaccaggtcaaacaggtggaggc
aatgtgaacaacttggggttggagatgttatcgagcatgtttggtggacttggagctggt
agcctagctgttccaaacagatcaaatgagccaccagagcaattgtatgctacccaactt
tcccaacttcaagagatgggattctttgacacacaagagaacataagggctcttattgct
acatcaggaaatgttcatgcagcagttgagcggcttttgggaaacaccggacagtag
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