Trifolium pratense (red clover): 123905720
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Entry
123905720 CDS
T08949
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123905720
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123905720
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
123905720
NCBI-ProteinID:
XP_045811381
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All DBs
Position
LG2:3972093..3977777
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AA seq
432 aa
AA seq
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MSSSNHQQQFRYTQTPSKVLHFRNLPWECSDEELADICSPFGKVMNTKCNVGANRNQAFV
EFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNSKGPGDVPGNVLLVTIEGV
EAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQYTDAETAASARNALDGRSIPRYL
LPENVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQTAIDIALQPVGPDGKRKEP
ESNVLLALVENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTVATAAKE
ALEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVLDPSLRATQVPAWQNTQAAPV
YPGLQGQMPSWDTNQQEVTQNYLSAPSSFPPGHAVPGYSPAAVPPASASPHAHMHPNSFS
GTSTPGMQPYYG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaaaccaccagcaacagttccgttacactcaaactccatcgaaggttctt
cactttcgcaatcttccatgggagtgttctgatgaagaactcgctgatatttgtagtcct
ttcggtaaagtcatgaatactaagtgtaatgttggtgctaatcggaatcaagcttttgtt
gaatttgcggatctaaatcaagcaatttcaatggtttcatattatgcttcatcttcagag
cctgctcaagttcgtggcaagactgtttacattcaatattctaatagacatgaaattgtc
aacagcaaaggacctggagatgtccccggaaatgtattgctggtaaccatcgaaggtgtt
gaagctggagatgtgagcattgacgttatccacttggtgttttctgcgtttggctttgtg
cacaagattgccacatttgaaaagactgcaggttttcaggctctgattcagtacactgat
gctgagactgctgcttctgctaggaatgcactcgacggaagaagcataccaagatacttg
cttccagagaatgttggttcttgcaatttgcgtatctcatactcagcgcaccgagacctc
aatatcaaattccaatccaatcgcagcagggactacactaatcctatgcttcctgttaat
cagactgctattgacatcgcattacagcctgttggtcctgatggaaagaggaaagaacct
gagagtaatgtgcttttggcattagttgaaaatatgcagtatgctgtcaccgtagatgtt
cttcacacggtgttttctgcatttggcactgttcaaaaaattgctatctttgaaaagaat
ggacaaactcaggcactgattcagtaccctgatgttacggtagcaacagcggccaaagaa
gctttggagggacattgcatatatgatggtggctattgtaagcttcatctaacatactct
cgtcatactgatctcaatgtaaaggctttcagtgacaaaagcagagactatacagtcctc
gatcccagtctccgtgcaacacaagttcctgcgtggcagaatactcaagctgctcctgtg
taccctggtttacagggacaaatgccatcatgggatacaaaccagcaggaagttacacaa
aattatttatcggcacccagtagttttccacctggtcatgctgttcctggctattccccg
gcagcagtgccccccgccagtgcctcacctcatgctcatatgcatcccaactcattttct
ggtacttctactcctggaatgcaaccttattatggttag
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