Trifolium pratense (red clover): 123905955
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Entry
123905955 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123905955
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123905955
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
123905955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Rtf2
zf-RING_16
zf-Nse
zf_RING_Vps8_fungal
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
123905955
NCBI-ProteinID:
XP_045811718
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All DBs
Position
LG2:47418900..47420660
Genome browser
AA seq
325 aa
AA seq
DB search
MLNFHLKLFNFTSLTTLIPFLILLFLNHVESQGSMQAVPTDISQHRWQPSLVITGGALLC
LLLFLGIIFCYVRNCVESRIIITDCPCSCSQGINKELLNTFPILFFSTIKDLKTDKGPLE
CAVCLTDFKENDTLRLLPKCNHVFHPQCIDSWLASHVTCPVCRANLNQDSCQVAMIIPTH
FNNDQTCEESPETVPEITLKTVPEIAQNNDSNDQNQNPNQIGDEMNKEESINCEDGHASK
LKLSRSNSTGHSLVEQVTCSERYTLMLPDDVRRYILVNHRKSFQLSMNNNMVKGLCWSDN
EGSSVGKRINSDAKVEKWVLCTRHG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattttcatctcaaactcttcaactttacttccctcacaactctaattccattc
ctcattcttctattcctaaaccatgttgaatcacaaggatccatgcaagcggttccgacc
gacatctctcaacatagatggcaaccttcccttgtaatcacaggaggtgccttactttgt
ctacttctattcttaggaatcatcttttgctacgtccggaattgtgtcgaatcacgcatc
ataatcactgattgtccatgttcatgttcacaaggtatcaacaaagaactcctcaacact
tttcctatcctctttttctcaacaatcaaggatcttaaaacagataaaggaccattggaa
tgtgcagtttgtttaacagatttcaaagaaaatgataccttaagattactacctaaatgc
aaccatgtttttcaccctcaatgcattgattcatggttagcttcacatgttacatgtcct
gtttgtcgcgcaaatcttaaccaagattcttgtcaagtagcaatgattattccaactcat
ttcaacaatgaccaaacgtgtgaagaaagtcccgaaaccgtgcccgaaatcactctaaaa
accgtacctgaaatcgctcaaaataatgattccaatgaccagaaccaaaacccgaaccaa
attggcgatgaaatgaacaaagaagaaagtatcaattgtgaagatgggcatgcatcaaaa
ttgaaactttcacggtcaaattcaaccggacattcattggttgaacaagtgacatgttcg
gagagatacacactgatgttaccagatgatgttagaaggtacattttggttaaccataga
aaaagttttcagctttccatgaacaacaacatggttaaagggttatgttggagtgataat
gaagggagcagtgtagggaagaggatcaatagtgatgcaaaggtggagaaatgggttttg
tgtacacgacatggttga
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