Trifolium pratense (red clover): 123906008
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Entry
123906008 CDS
T08949
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
tpra03013
Nucleocytoplasmic transport
tpra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123906008
03008 Ribosome biogenesis in eukaryotes
123906008
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123906008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123906008
03009 Ribosome biogenesis [BR:
tpra03009
]
123906008
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123906008
03036 Chromosome and associated proteins [BR:
tpra03036
]
123906008
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123906008
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123906008
Pre-60S particles
123906008
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
123906008
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123906008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
123906008
NCBI-ProteinID:
XP_045811790
LinkDB
All DBs
Position
LG2:complement(42436618..42449501)
Genome browser
AA seq
1078 aa
AA seq
DB search
MAADKLRDLSQPIDVPLLDATVAAFYGTGSKEQRTAADQILRELQNNPDMWLQVMHILQK
TQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDVIVQLSGNEASFRTERLYVNK
LNIILVQILKHEWPARWRNFIPDLVSAAKTSETICENCMSILKLLSEEVFDFSRGEMTQQ
KIKDLKQSLNSEFQLIHELCLYVLSVSQRTELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPMPAYRNLTLQCLTEVASLQFDNYYDAQYVKMYNIFMVQLQAILPPTTNIPEAYA
QGSTEEQAFIQNLALFFTLFYKVHIRILESTQENISALLLGLEYLINISYVDDTEVFKVC
LDYWNILVSELFQSHRSLENPAATATNMMGSQVSLIPPGMVDGLDSQLLQRRQLYSGPMS
KLRMLMICRMAKPEEVLIVEDENGNIVRETMKDSDVLVQYKIMRETLIYLSHLDHDDTEK
QMLRKLSKQQNGKDWTWNTLNTLCWAIGSISGSMIEDQENRFLVMVIRDLLNLCEVTKGK
DNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQK
CRRKFVVPQVGENEPFVSELLSGLPTTIADLEPHQIHTFYESVGSMIQAETDAQKRQEYL
QRLMVLPYQKWLEIIGQARQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQISLIF
LDMLNVYRMYSELISKSIAEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAENQPEIGK
QFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKATMIEDIPHIFEAVFQCTLEMI
TKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKFVMDSIIWAFRHTERNIAETGL
NLLLEMLSKFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCQAES
GALTEPIWDTATNSYPYPSNAAFVREFTIKLLSTSFPNMTAAEVTQFVNGLFLSTNDLSA
FKTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgataaactccgtgatttgtctcaacctattgatgtccctttactcgatgct
actgtcgctgctttctatggcaccggatctaaagaacagagaactgctgctgatcagatt
ttgcgggaattgcaaaacaatccggatatgtggcttcaagtcatgcatattttacagaag
actcaaaatctaaatactaagttctttgctttgcaggtgctagagggtgtaattaaatat
agatggaatgcattaccagctgagcagcgggatggaatgaaaaatttcatctctgatgtt
atcgtacagctttctggaaatgaagcctcatttcgaacagagcggttgtatgtcaacaaa
ctcaatattatattagtccagattttgaagcatgagtggccagcaagatggcgaaacttt
attcctgaccttgtttcagcagctaaaactagcgaaactatttgtgagaactgtatgtct
atattgaagcttttgagtgaagaggtttttgatttttcaagaggagagatgactcagcag
aagattaaagatcttaaacaatcgttgaatagtgaatttcagctcatacacgagttatgc
ttatatgtgttatcagtttcccaacgaactgagctcatacgtgcaacactgtctacattg
catgccttcttatcttggattcccttgggttatatatttgaatcaccattgctcgagaca
ttactgaagtttttcccaatgccagcatatcggaacctgacattgcaatgtttaactgag
gtggcatcccttcaatttgacaattactatgatgcccaatatgttaagatgtataacata
ttcatggttcagttgcaggccatactcccacctactacaaatatacctgaggcatatgca
caaggttcaactgaggaacaagcatttattcagaatttggcgctgttcttcaccttattt
tacaaggttcacatacgtattctggaatccacacaagagaatatctctgctttactattg
ggtcttgaatatcttatcaacatctcatatgtagatgatactgaggttttcaaggtctgt
ctggactattggaatatcttggtttcagaactttttcagtcacaccgtagcttggagaac
cctgctgcaacagccacaaacatgatgggatcacaggtgtcactaatacctcctggtatg
gttgatggccttgactcacagcttcttcagcgccgacagctttattctggtcccatgtct
aagttgagaatgcttatgatctgtcgtatggcgaaaccagaagaggttcttatagttgaa
gatgaaaatgggaatatagtccgtgaaaccatgaaagacagtgatgttcttgttcaatat
aagattatgagggaaactcttatttacttgtcacatctggatcatgatgatactgaaaag
cagatgcttaggaaattaagtaagcaacaaaacggtaaggattggacatggaacactttg
aatacattgtgctgggcaataggatctatatcgggttccatgatcgaagaccaggagaac
agatttttggttatggtcattcgtgatttattaaatctatgtgaagtaacaaagggaaaa
gataacaaagctgtcattgctagtaatatcatgtatgttgtagggcaatatccgcggttt
ttaagagctcattggaagtttctaaaaactgttgttaataagttgttcgagtttatgcat
gaaacacatccaggagttcaggatatggcctgtgatacatttttgaaaatagtccaaaag
tgtaggagaaaatttgtagtcccccaggttggggaaaatgagccatttgtgtctgaactt
ttatctggccttccaactacaattgcagatcttgaaccccatcaaatacacaccttctat
gaatctgttggcagcatgattcaagcagaaactgatgcccagaagagacaggaatatctt
cagcggttaatggtgcttccatatcagaaatggctggaaattattggacaggcacgtcaa
aatgttgatttccttaaagatcaagatgtcattcgaactgtgcttaatatattgcagacg
aatacaagtgttgcatcatctttaggaacatttttcctgccccaaatctcattgatcttt
ttggatatgttgaacgtgtacaggatgtatagtgagcttatatcaaaaagtattgcagaa
ggggggccttacgcatctaaaacctcatatgttaaacttctgcgttcggttaagagggag
acacttaaactgattgagacattcttggacaaggctgaaaatcaaccagaaattggaaaa
caatttgtgccaccaatgatggatcctgttctgggagattatgccaggaatgtgcctgat
gcaagggaatcagaggttttgtcactttttgccacaattataaataaatataaagctaca
atgattgaagacatccctcacatatttgaagctgttttccagtgcacacttgaaatgatt
acgaaaaactttgaagattacccggagcataggctaaaatttttctctttactacgtgcc
atagctactcattgtttccctgcgttgatctgcttgtctagtcagcaactgaagtttgtt
atggattcaatcatatgggcatttcggcatacagaaagaaatattgctgaaactgggttg
aacctgttgttggagatgctaagcaagtttcaggcttcggagttctgcaatcagttttac
cggacatattttttgacaatagaacaagagatatttgctgtcttgacagacacttttcat
aagcctggattcaaattgcatgttttggtgcttcaacatttattttgtcaggctgaatct
ggtgccctgactgagcctatatgggatactgctacaaattcatatccatacccaagcaat
gctgcttttgtacgcgaattcacaataaaacttttaagcacatcatttcccaacatgact
gctgctgaggttacacaatttgttaatgggctctttttgtccacaaatgacctctccgca
ttcaaaactcacatacgtgattttcttatacagtcaaaagaattttctgcccaggataac
aaagatctttatgctgaagaggctgcagctcagagagagagagaacggcaaagaatgctt
tctattccaggactcattgccccaattgagttgcaagatgaaatggtggactcatag
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