Trifolium pratense (red clover): 123906027
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Entry
123906027 CDS
T08949
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123906027
Enzymes [BR:
tpra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
123906027
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
123906027
Prokaryotic type
123906027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
123906027
NCBI-ProteinID:
XP_045811815
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All DBs
Position
LG2:complement(40920906..40924646)
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AA seq
511 aa
AA seq
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MLASYLSDDDSQIMASTPSPPMSPPVNAGRIRTLKEGSGKTGPVVYWMFRDQRLKDNWAL
IHAVHQANKSNVPVAVVFNLFDHFLGAKSRQLGFMLKGLRQLCHQLQYTLQIPFFLFQGE
AEETVSKFVRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNIVPLWVASE
KLEYSARTIRGKINKKLSDYLVDFPNVESPTMKWGSTEDHAIDWDEIIAQVLRSGAEVPE
VNWCEPGESAAMEVLMGSKNGFLTKRLGSYSTDRNNPCKPTALSGLSPYLHFGQISAQRC
ALEARKLRASYPQAVDTFLEELIVRRELADNFCYYQPHYDSLQGAWEWARKTLLDHASDK
RQHNYTREQLEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICI
YLNDKYEMDGRDPSGYVGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVDRYIAY
VNKLVGELRKRKAENLPSQKEKVLRHCNPED
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaagctacctctccgacgacgattcccaaatcatggcttcaacaccgtcgcct
ccaatgtcgccgccggtaaacgcaggtcgcattcgaaccttaaaagaaggttctggaaaa
acaggtcccgtcgtgtactggatgttcagagatcaacggttgaaagacaattgggctctc
atccacgccgttcatcaagccaacaaatccaatgttcccgttgccgttgttttcaatctc
ttcgatcactttctcggtgcaaagtctcgtcaattagggtttatgcttaagggtttgcgt
caattgtgtcaccaacttcaatacacgcttcaaataccctttttcttgtttcagggtgag
gcagaggaaactgtatcgaaatttgttagagaatgtggagcttcacttttggtgacagac
atgtcacctttaagagaagtgaagaaatgcaaagctgagatttgtgagagggttagcgat
ttggttacagttcatgaagttgatgctcacaacattgtgcctctttgggtagcttctgag
aaattggagtacagtgctagaacaataaggggaaagataaacaaaaagctttctgattat
cttgttgattttccgaatgttgaatcaccaactatgaaatggggtagcaccgaggatcac
gccatagactgggatgaaatcattgctcaagtgttaaggagtggagctgaggttcctgaa
gttaattggtgtgagcctggagaaagtgctgctatggaagtattgatgggaagtaaaaat
ggattcttgactaaaaggttgggaagttattccacagatcgcaataacccttgtaaacca
accgcactttctggtttatctccctatttgcattttggacagatatctgctcaaagatgc
gcgttagaagctcgtaaactacgagcttcatatcctcaagcggttgatactttcttggag
gagttgattgtgcggagagaacttgccgataacttttgctactatcagcctcattatgat
tcattacaaggagcatgggaatgggctcgtaagaccttactcgatcacgcgtctgataag
cgacaacataattacacgagggagcaattggagaaggcacaaactgctgatcctctctgg
aatgcttctcaactggagatggttcactatgggaaaatgcatggttttatgagaatgtat
tgggcgaagaagatacttgaatggacaagaggacctgaggaagcacttgagatatgtata
tatttaaatgataagtatgaaatggatgggagggatccaagtggttatgttggctgtatg
tggtctatatgtggggtacacgatcagggttggcgagagcgtcccatttttgggaaaatt
cgatacatgaattatgaagggtgcaaaagaaaatttgatgttgacagatacattgcatat
gttaataaattagttggcgaactgaggaagagaaaggctgaaaatttgccgtcacaaaag
gagaaagtactccgccattgtaatcccgaggattga
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