Trifolium pratense (red clover): 123906056
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Entry
123906056 CDS
T08949
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123906056
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123906056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_Aladin
DSE1_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
ASA1
CFAP251_N
Beta-prop_RIG_2nd
NLE
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WD40_RFWD3
Tricorn_2nd
eIF2A
PAC11
Beta-prop_SPT8
WDR54
RMC1_N
Tricorn_N
Ge1_WD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
PD40
Beta-prop_WDR75_2nd
TRM82_WD
Beta-prop_ELP1_1st
PQQ_2
Motif
Other DBs
NCBI-GeneID:
123906056
NCBI-ProteinID:
XP_045811860
LinkDB
All DBs
Position
LG1:complement(52586062..52592654)
Genome browser
AA seq
479 aa
AA seq
DB search
MEIDTDTTVEKRVIINNVMCLLTDPDGAPLGAPMYLPQNIGPQQLQLIVNQLLRNEEKLP
YAFYISDEELLVPLETYLQKHKVSVEKALPIVCQPQAVFRIRPVSRCSATISGHGEAVLS
VAFSPDGRQLASGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIEWSPDGKYLVSGSKSGE
LICWDPKTGKQSGNALIGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLKKCI
VLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHAHWVNSLALSTEYV
LRTGAFDHTGKHYSSAEEMQKVALERYKAMRGNAPERLVSGSDDFTMFLWEPFVDKHHKT
RMTGHQQLVNHVYFSPDGQWIASASFDKSVKIWNGTTGKFVTAFRGHVGPVYRISWSADS
RLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSPDGEKVASGGKDKVLKLWMG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatacagatacaacagtggagaagagggtgataataaacaacgtcatgtgt
cttttgacagacccagatggtgctcctcttggtgctcctatgtatctacctcagaatatc
ggtccacaacaactccaactcattgttaatcagcttctacgcaatgaggagaaattgccg
tatgctttttatatatcagacgaggagcttcttgtaccacttgaaacatacttgcaaaag
cacaaagtctcggtggaaaaggcattgcctatagtttgtcagcctcaagctgttttccgg
attcgtcctgtgagtcgatgttccgcaacaatttctggtcatggcgaagctgtgttgagt
gttgcctttagtcctgatgggcgacagctggcaagtggttctggtgatactactgttcga
ttttgggaccttggaactcagacaccaatgtacacatgcacaggacacaaaaactgggtc
ctttgtattgaatggtcaccagatggcaagtatcttgtaagtgggagcaagtcaggagaa
cttatctgttgggacccaaaaactggaaagcagtcaggaaatgctctaattggccacaag
aaatggattaccggtatctcttgggaacctgtccacctgaatgctccttgccgtcgcttt
gtaagtgccagcaaagatggagatgctcgtatttgggatgtttctttaaagaaatgcatt
gtactcagtggccacacacttgcagtaacatgtgtcaaatggggtggcgatggtgtaatt
tatacggggtcccaggattgtacaatcaaagtttgggaaaccacacaagggaagctaatt
cgggaactgaaggggcacgcgcattgggttaattctttggcattgagcacagagtatgtt
cttcgcactggagcttttgatcatactggaaaacattattcatctgcagaggaaatgcag
aaggtcgctcttgaaaggtacaaagcaatgagaggtaatgcgcctgaaagattggtctct
ggatctgatgatttcacaatgttcctttgggaacccttcgtcgacaagcaccacaaaact
cgcatgacaggtcatcagcagcttgtgaaccatgtctatttttcacctgatgggcaatgg
atagcgagtgcatcttttgataaatctgtgaagatatggaatggaactacaggaaaattt
gtcactgcctttcgtggccatgttgggcctgtttaccggatcagctggtctgctgacagt
agacttcttttaagtggcagcaaagattctacacttaaggtttgggatattcggactcgc
aagttgaagcaagaccttccgggccatgccgatgaagtgttttctgttgattggagtcca
gatggagagaaggtagcttctggtggtaaggataaagtgttgaagttgtggatgggatag
DBGET
integrated database retrieval system