Trifolium pratense (red clover): 123906208
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Entry
123906208 CDS
T08949
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123906208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123906208
03036 Chromosome and associated proteins [BR:
tpra03036
]
123906208
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
123906208
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
123906208
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
RMC1_N
WD40_RFWD3
KNTC1_N
Beta-prop_VPS8
DPPIV_N
PD40
CFAP43_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
123906208
NCBI-ProteinID:
XP_045812025
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All DBs
Position
LG2:53622985..53625808
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AA seq
450 aa
AA seq
DB search
MDSGSLSSPAVKIESRYPLRRKTSRENLDRFIPNRSAMDFDFAHYMLTEGAKGKENPVVC
SPSRQAYRKLLAEALNMNRTRILAFKNKPPTPVDLIPHEITLSIHQQDRTAKPRRIIPQT
SERTLDAPGLVDDYYLNLLDWGSANVLAIALGNTVYLWDASNGSTSELVTVDEENGPITS
VSWAPDGRHIAVGLNNSEVHLWDTASDKQLRTLRGGHRQRVGSLAWNNRILTTGGMDGRI
INNDVRIRSPIVETYRGHEQEVCGLKWSASGQQLASGGNDNLLYIWDRGTASSSSPTQWL
HRLEDHTSAVRSLAWCPFQRNLLATGGGSGDQSIKFWNTHTGACLNSVDTGSQVCSLLWN
KNERELLSSHGFTQNQLTLWKYPSMVKMGELNGHTSRVLYMAQSPDGCTVATAAADETLR
FWNAFGTPEVVTKAAPKARAEPFSHMNRIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggatctttgagttctcccgccgtcaaaattgaatcacgctatcctcttcgg
agaaagacttccagagagaatttggacagattcataccgaatagatcggcaatggacttc
gattttgctcactacatgctgacagaaggagctaaaggtaaggaaaacccagttgtgtgc
tccccttccagacaggcttacaggaagctacttgcagaagctttaaacatgaaccggacc
aggattctagctttcaagaacaagccgcctacgccagttgatttgatccctcatgagatt
actttatcaattcatcaacaagacagaaccgccaagcccaggcgaattattcctcagact
tctgagaggacattggatgctcctggccttgtggatgattattacctcaatttattggat
tggggaagtgccaatgttcttgcaatagcacttggaaacacagtgtatttgtgggatgca
tcaaacggttccacttcagaactcgttaccgtggatgaagaaaatggcccgatcacatcc
gtaagctgggctcctgatgggcgtcatattgctgttggtttgaacaactctgaagttcat
ctgtgggatacggcttcagataagcagttgagaactttaagaggtgggcataggcagcgt
gtggggtctttggcatggaacaatcgcatactaacaactggagggatggatggtagaatc
atcaataatgatgtaagaattagatcacccattgttgaaacatacagagggcatgagcaa
gaagtttgtgggttgaaatggtctgcttcaggtcaacaattagccagtggtgggaatgat
aatctactttatatctgggatagaggtacagcatcttctagttccccaacacagtggctc
cacaggcttgaggatcatacatctgcagtaaggtcacttgcttggtgtcctttccaaagg
aatttgctagctactggtggaggtagtggcgatcaaagcatcaagttttggaatacacac
acaggtgcatgcttgaactcagttgacactgggtctcaggtatgttccctgttgtggaac
aagaatgagagggagttgctcagctctcatggatttacacagaatcaactaacactttgg
aaatatccttcaatggtgaagatgggagagctcaatggtcacacttcaagagttctttat
atggcgcagagcccggatggttgcacagtggcaacagcagccgcagacgaaacattgagg
ttttggaatgcttttggcactccagaagtagtcaccaaagctgcaccaaaagcgagagca
gagccattttcacatatgaatcgcattcgataa
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