Trifolium pratense (red clover): 123906280
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Entry
123906280 CDS
T08949
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123906280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123906280
04131 Membrane trafficking [BR:
tpra04131
]
123906280
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123906280
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpra04812
]
123906280
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123906280
mRNA cycle factors
P-body specific factors
123906280
Membrane trafficking [BR:
tpra04131
]
Others
Actin-binding proteins
Myosins
123906280
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123906280
Cytoskeleton proteins [BR:
tpra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123906280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
CbiA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123906280
NCBI-ProteinID:
XP_045812112
LinkDB
All DBs
Position
LG2:37835371..37850196
Genome browser
AA seq
1530 aa
AA seq
DB search
MSAPVNIIVGSHVWVEDPGLAWIGGEVTKINGEEVHVRIGDGKTVVKSISKVFPKDNEAP
PGGVDDMTKLSYLHEPGVLNNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMQQY
KGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLE
RSRVCQVSDPERNYHCFYLLCAAPAEEREKFKLGNPSSFHYLNQSNCYQLDGVDDAEEYL
ATRRAMDIVGISEEEQEAIFRVVAAVLHLGNVEFAKGEEIDSSVLKDEKSRFHLNTTAEL
LKCDAKSLEDALIQRVMVTPEEVITRTLDPIAALGSRDALAKTMYSRLFDWLVEKINNSI
GQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTNFTISHYAGEVTYQADMFLDKNKDYVVAEHQDLLIASKCSFVAGLFPPSPEESSKSS
KFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLNRFGVLAPEVLDGSYDDKVACQMILGKMGMKGYQIGKTKVFLR
AGQMAELDARRSEVLGNAARIIQRQTRTHIARKEFIELRRAAISLQSNLRGILARKLYEQ
LRREAAALKIQKNFKGHIDRKSYLKARSSAIILQTGLRSMKARDEFRFRKQTKAAIKIQA
HFRRKIAYSYYKRLQKAVVVTQCGWRSRVARKELRMLKMAARDTGALKEAKDKLEKRVEE
LTWRLQIEKRLRTDLEEEKAQEAAKLHDALHAMQIQVAEANARVIKEREAAQKAIEEAPP
VIKETPVIIEDTEKINSLLAEVNSLKESLLLEREAKEEAKKAQAESEARNKELVKKVEDS
DRKADQLQELVQRLEEKISNAESENQVLRQQALVASPTGKALTARPRTVILQRTPENGNT
LNGEAKTGLDMTLALSNVREPESEGKPQKSLNDKQQENQDLLIKCISQDLGFSGGKPVAA
CVIYKCLLHWRSFEVERTTVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLMLLQRTLK
ASGAANLTPQRRRTASSSLFGRMSQGLRASPQSAGLPFINGRGLSRLDGLRQVEAKYPAL
LFKQQLTAFLEKLYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIA
HWQSIVKSLNSYLKIMKANYAPPFLVRKVFTQIFSFIDVQLFNSLLLRRECCSFSNGEYV
KTGLAELEQWCIEATEEYTGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPGLSIQ
QLYRISTMYWDDKYGTHSVSTDVTTTMRAMVAEDSSNAVSTSFLLDDDSSIPFSVDDISK
SMQEVEVADVDPPPLIRENSGFGFLLARSE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccagtgaacattattgttggttctcatgtctgggttgaagatccaggacta
gcatggattggtggagaagttactaaaatcaatggtgaagaagtccatgttcgcatcgga
gatgggaaaacagttgtcaaaagtatctcaaaggtttttcccaaggataatgaagcccca
cctggaggtgtagatgacatgacaaaactgtcatacttgcatgagccaggagtgctgaac
aacttggcaactcgatatgaacttaatgaaatctatacatatactggaaatatcctgatt
gcgataaacccatttcaaaggttaccacatttatatgatactcacatgatgcaacaatac
aaaggagctgcatttggagaattgagtccccatgtttttgcagttgcagatgttgcatac
agggcaatgatcaatgagggaaaaagcaactcaatcctggttagtggtgagagtggggct
ggtaagacagaaacaacaaaaatgcttatgcgatatcttgcatatcttgggggccgatct
ggagtagaagggcgaacagttgaacaacaagttttagaatctaatccagttcttgaagca
tttggaaatgccaaaacagtgagaaacaataattcaagtcgttttggtaaatttgttgag
atacaatttgacaacaagggaaggatttctggggcagctatacgaacttatctacttgag
aggtcccgtgtttgtcaagtttcagatcctgaaagaaattaccactgtttttaccttctt
tgtgctgcaccagctgaggaaagagaaaagtttaagctgggaaatcctagctccttccat
tacctaaaccaatccaactgctatcagctggatggagtggatgatgctgaagaatatctt
gcaactcgaagggcaatggatattgttggaatcagtgaggaggaacaggaggctattttt
agggtcgtagcagcagttttgcaccttggaaatgttgaatttgcaaaaggagaggagatt
gattcttctgtccttaaggatgagaagtctaggttccatcttaatacgactgctgagctt
ctcaagtgtgatgctaagagcttggaagatgcactgatccagcgtgtgatggtaacacct
gaggaggttattacaagaacacttgatcctattgcagctctcggtagcagggatgcacta
gctaaaactatgtattctcgtttatttgactggctagtggagaagatcaacaattcaatt
gggcaagatccaaattcaaaatctatcattggagttcttgatatctatgggtttgaaagt
tttaagtttaacagttttgagcagttctgtattaattttacaaatgagaaactgcagcaa
cattttaatcagcatgtctttaaaatggaacaagaagaatacaccaaagaagaaattgat
tggagttacatagagtttgttgacaaccaagatgttttggatctaattgagaagaaacct
ggaggaataatttcacttcttgatgaagcctgtatgtttcctaagtctacacatgaaaca
tttgctcagaagttgtaccagacattcaaaaacaacaagcgctttatcaaaccgaaactt
tctcgaactaatttcacgatatctcattacgccggggaggtgacatatcaagctgatatg
tttctggacaaaaacaaggattatgtggtggcagaacatcaggatctgttgattgcctca
aaatgctcctttgtggcaggtctattccccccctccccagaagagtcttcaaaatcatca
aaattctcttcaataggatctcgctttaagttacaacttcagtctttgatggagacccta
agttcaacagaacctcactatattagatgtgtgaagccaaataatgttctcaagcctgca
attttcgaaaatgtcaatattattcaacaattgcgctgtggtggtgttctagaggcaatt
agaatcagctgtgctggatatcctacaagacggaccttttacgaatttctcaaccgattt
ggtgtgcttgcccctgaagttctggatggaagctacgatgacaaggttgcatgccaaatg
atcctgggtaaaatgggcatgaaaggttatcagataggcaaaacaaaggttttcctaaga
gcaggccaaatggctgagctggatgcaagaagatctgaggtccttggaaatgcagctaga
atcatccagaggcaaacacgtacccatattgcacgaaaggaattcattgaattgcgtcga
gctgcaattagtttgcaatctaatttgcgaggaatattggcccggaagctttatgagcag
ttgcgacgtgaagcagcagctctgaaaatacaaaagaacttcaaaggacacattgacaga
aaatcttacttaaaagcacgatcatctgcaatcatattgcagacaggtttaaggtctatg
aaggctcgtgatgaatttagatttagaaagcaaacaaaggctgcaattaaaattcaggct
cattttcgtcggaaaattgcatattcatattataaaagattgcaaaaggctgtggttgtt
actcagtgtggttggaggagcagggttgccagaaaagaacttagaatgcttaaaatggct
gcaagagatacaggggctcttaaagaagcaaaagacaaactagaaaagcgtgttgaagaa
cttacatggcgtttgcaaattgagaagcgtttgagaactgatttggaagaggaaaaggca
caagaggctgccaagttacatgatgctttacatgcaatgcaaatacaagttgcagaagca
aatgctagggtcatcaaagagcgtgaggcagcacagaaagccattgaagaagcacctcca
gttattaaagagactcctgttataattgaagatactgaaaagattaattctctattggct
gaagtcaatagtttgaaggagtcactgttattagaaagagaggctaaagaagaggccaaa
aaagctcaggctgagtctgaagctagaaataaggagctggttaaaaaagttgaggattct
gaccgcaaagcggatcaactgcaagaattggttcagagattggaggagaaaatttccaat
gcagagtcagaaaatcaagttcttcgccagcaagcattggttgcatcaccaactggaaaa
gctcttactgcaagacctaggacggtaattcttcagaggacaccagaaaatgggaatact
ctaaatggtgaagcaaaaactggattggatatgactcttgcactatccaatgtacgtgag
cctgaatctgaaggaaaaccacagaaatctctcaatgataaacaacaggaaaaccaggat
ttgttgatcaagtgcatatcacaagatttgggattttctggtggcaaacctgttgctgca
tgtgtcatatataaatgccttctacactggaggtcatttgaagttgaaagaacaaccgtc
tttgatcgtatcattcaaacaatagcttcagctgttgaggcccaggataatactgatgta
ttagcctactggttatctaatacatctactttattgatgcttctccaacgcacccttaaa
gcaagtggagctgctaacttaacaccacaacgccgaagaacagcctcatcttctttgttt
ggaagaatgtctcaagggctaagggcatctcctcaaagtgctggattgccatttataaac
ggtcgaggtcttagtagacttgatggtttacgacaagtagaagcaaaatatccagcactt
ctgtttaagcaacagcttactgccttccttgagaaattatatggaatgatacgagacaac
ctgaaaaaggagatatccccattacttggactgtgtatacaggctccaaggacctctcgt
caaggtttagtaaaagggcgctcacatgctaacgcggttgctcagcaagctttaatagct
cactggcaaagtattgtgaaaagcttgaacagctatctaaagataatgaaagcaaactat
gcgcctcctttcttggttcgtaaagtgttcactcaaatattctcattcattgatgttcaa
ttattcaacagtctcctgctgcgtcgtgagtgttgttcattcagcaatggggagtatgtg
aagacaggtttggctgaattagaacagtggtgcatcgaggcgacagaggagtacaccggc
tcagcttgggaggaactgaaacatatcaggcaggcagttggattcctggtgatacatcaa
aaacccaagaagtcactgaatgaaataactaaggagctttgtccaggtctcagtatacaa
cagttatacaggataagtacaatgtactgggatgacaaatacggcactcacagcgtgtct
acagacgttacaacaaccatgagagctatggttgccgaagactcttctaatgctgtcagc
acttctttcctattagatgatgactcgagcattccattttcggtggacgacatctccaaa
tccatgcaagaagtagaagttgctgatgtggatcctcctccattgatacgtgagaactca
gggttcgggttcttactagctcgttcggagtaa
DBGET
integrated database retrieval system
