Trifolium pratense (red clover): 123906320
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Entry
123906320 CDS
T08949
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123906320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123906320
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123906320
04121 Ubiquitin system [BR:
tpra04121
]
123906320
Enzymes [BR:
tpra01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
123906320
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123906320
Complex C
U4/U6.U5 tri-SnRNP related factors
123906320
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
123906320
Chaperones and folding catalysts [BR:
tpra03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
123906320
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
U-box type E3
123906320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
U-box
Rtf2
V-set_CD47
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
123906320
NCBI-ProteinID:
XP_045812177
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All DBs
Position
LG2:complement(65843376..65850193)
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AA seq
590 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGFKSKENRTVFKRLPFYCCALTFTPFEFPVCTPDGSV
FDVMNITPYIIKYGKHPVTGAPLKQQDLIQLNFHKNSEGEYHCPVLNKVFTEFTHIVAVK
TTGNVFCYEAVKELNIKTKNWKELLTDEAFTKDDLITIQNPNALDQKVLLDFDHVKQNLK
VEDEEQQKMNSDPTYNINMSGDIKQMLKELGTEEGKETALHGGGGGKAQKERAAALAAIL
AARSHVKEDSKSNADGAPQALSIVDAASAALHGRSAAAAKATSSDKTAARIAMHVAGDRA
PVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVQLHTTHGDLNIE
LHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEL
NSKLVHSRRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGIVVGGLPTLTTMEKVP
VDDSDRPLEEIKITGVTTFVNPYTEPDEEEEQANAKEKNANDEENDKVGSWYSNPGAGTS
ESGGTGGGVGKYLKAKNVSAEPAAVDTATAVVGKKRKAVVSGEFKDFSAW
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagcagcatagcaaagaccgaatgttcataaccaaaactgaatgggcaacg
gaatggggaggtttcaaatccaaagaaaatcgcaccgttttcaaacgtcttcctttttat
tgctgcgcacttacgtttactccgtttgagtttccagtttgtactcctgatggcagcgtt
ttcgatgttatgaacataactccatatattataaaatatggtaaacatcctgtaactgga
gctcccttgaagcagcaagatctcatccaactaaattttcacaagaactcagaaggagaa
tatcactgtccagtgctaaacaaagttttcactgaatttacacacattgtggcagtcaag
actactggaaatgtcttctgctacgaggccgttaaagagttaaacatcaagacaaaaaac
tggaaggagcttctcactgatgaggcgtttactaaggatgaccttataacaattcagaat
cctaatgcacttgaccagaaggtgcttctggattttgatcatgtcaaacaaaatttgaaa
gttgaggatgaagaacaacagaaaatgaattcagatccaacatataacataaacatgtcc
ggtgatatcaagcaaatgcttaaggagcttggaactgaggaaggaaaggaaactgcattg
cacggtggaggtggtggcaaggcacaaaaagaaagggccgctgcacttgctgcaatctta
gctgcaaggtcacatgttaaagaagattccaaatcgaatgccgatggagctccccaggca
ctcagtattgtagatgctgcctctgccgcattacatggaagaagtgcagctgctgctaaa
gccacatcaagtgataaaactgctgcccggatagctatgcatgtggctggtgacagggca
ccagtgaatgcaaagatggttaaaagtcgttacactactggtgctgcttcccggtctttc
acttcaacatcatatgacccagttacaaaaaatgattatgaatatgtgaaagttgagaag
aatccaaagaaaaagggatatgtacaactgcatacaacacatggtgatttgaacattgag
ctgcattgtgatatagcgcccagggcatgtgagaactttatcacgctttgtgaacgtgga
tattataacggagtagcttttcatagaagcattaggaattttatgatacaaggtggcgat
cctactggtactggtaaaggtggtgaatcgatctggggaaaaccttttaaggatgaactc
aactccaaattagtccactctcggaggggtgtggttagcatggcaaacagtggcccacat
actaatggttcccagtttttcatcttgtacaaatctgcaaatcatttaaacttcaaacat
acagtttttggaatagtagttggtggcttgcctacactaacaacaatggaaaaggttcct
gttgatgacagtgaccgacctctggaggaaatcaagataacaggtgttacaacgtttgtc
aatccttacaccgaaccagatgaggaagaagagcaagctaatgccaaagagaagaatgca
aatgatgaagaaaatgacaaggttggctcatggtatagtaatcctggagctggaacttct
gaatctggaggtactggtggtggcgttggcaaatacttgaaagctaagaatgtttcggct
gaacctgctgctgtcgacaccgctacagcagttgtaggaaagaaaagaaaagcagttgtc
agtggtgaatttaaagatttttctgcttggtaa
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