KEGG   Trifolium pratense (red clover): 123906416
Entry
123906416         CDS       T08949                                 
Name
(RefSeq) protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03050  Proteasome
tpra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    123906416
  09124 Replication and repair
   03440 Homologous recombination
    123906416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123906416
   04131 Membrane trafficking [BR:tpra04131]
    123906416
   03051 Proteasome [BR:tpra03051]
    123906416
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123906416
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     123906416
Membrane trafficking [BR:tpra04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    123906416
Proteasome [BR:tpra03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     123906416
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     123906416
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 123906416
NCBI-ProteinID: XP_045812272
LinkDB
Position
LG2:complement(68793983..68795851)
AA seq 91 aa
MATEAKAVTEDVKIDLFEDDDEFEEFEINESITHKLSNLIHFIVLQLTEWDDKEEGKEVT
QQWEDDWDDDDVSDDFSVQLRRELESTTEKN
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcgaccgaagcaaaggctgtgactgaggatgtcaagatcgatctatttgaagatgat
gacgaatttgaagagtttgaaatcaatgaaagtataactcataaactcagtaatcttatt
cacttcattgttttacaacttacagagtgggatgacaaggaggaagggaaagaagtaacc
caacagtgggaggatgattgggatgatgatgatgttagtgatgatttctctgttcagctg
agaagggagttggagagcactactgagaagaattaa

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