Trifolium pratense (red clover): 123906784
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Entry
123906784 CDS
T08949
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03410
Base excision repair
tpra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123906784
03450 Non-homologous end-joining
123906784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123906784
Enzymes [BR:
tpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123906784
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123906784
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
123906784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
HHH_5
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123906784
NCBI-ProteinID:
XP_045812737
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All DBs
Position
LG2:complement(21262806..21270021)
Genome browser
AA seq
536 aa
AA seq
DB search
MSPKTKKEQSDPHGMFSGMFVFFVAKGVQARRLQIWKQRMVQMGAVIEERFSKRVTHVLA
VDSLTILQEFDSHRLSRFKGRVLLYQWLEDSLKSGEKLSEDLYVLKLDSQGKGINEPEKF
LDPKPTDRSISCEPHQLQNKKIKSSSEDTEIVNLGSNEDRRENGPLSSTSTASSPGEVES
LNYADKRPQHLDAENEASSLPYCPPDQNKKITEIFGKLVNIYRAMGEDRRSFSYHKAISV
IEKLPFKIESADQIENLPSIGKSMKDHIQEIITTGKLSKLEHFETDEKVQTISLFGEVWG
IGPATALKLYDKGHRTLDDLRNDDSLTNAQKLGLKYFDDIRQRIPRHEVQEMEQILQKVG
EDLLPGVTIICGGSYRRGKATCGDIDIIITHPDGTSHKGFLPRFVNRLKDMNFLREDLIF
SSHSEEGTDSGVGTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRQQ
AESKGFRLDDTGLFPSTQGSGGKRGTKGTANMKLYTEREVFDFLGVPWLEPHERNL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaagacaaaaaaggaacaatctgatcctcatggaatgttttctggaatgttt
gtcttctttgtcgcaaaaggagttcaagctcgtcgattacagatttggaagcagaggatg
gtgcaaatgggtgctgttatagaggagcggttttcaaaacgtgttactcatgttttggct
gtggattcacttactattctgcaggaatttgatagccatcgtttgtcacgttttaaaggg
cgagttctcctttatcaatggctggaggacagcttgaaatcaggggagaaactatctgag
gatctgtatgtactgaagttggattctcaaggtaaaggtatcaatgaacctgagaagttt
ttggatcctaagccaactgacaggagcatttcttgcgaacctcatcaattacagaataag
aagatcaaatcatcttccgaggatacagaaattgtaaacctaggaagtaatgaagataga
agagaaaatgggccactttcatcaacaagcacggcaagcagtcctggtgaagttgagagt
ttaaattatgctgataaaagaccgcaacaccttgatgctgaaaatgaagcttcatccttg
ccgtactgcccacctgatcaaaacaagaaaattaccgaaatatttgggaaacttgtgaac
atatatagagcgatgggggaggaccggagatcctttagctatcacaaggctatttcagtg
attgagaagttgccatttaaaattgaaagcgcggaccagatagaaaacctcccgtcaatt
ggaaaatcaatgaaggaccatattcaggagataatcactactgggaagttatcgaaattg
gaacactttgaaactgatgaaaaggtgcaaacaatatccttatttggagaagtatggggt
ataggtccagccacagcgttgaaattgtatgacaaaggacatcgtacactagatgatctt
aggaatgatgattcacttacgaatgcacagaagttagggttgaaatactttgatgatatc
aggcaacggattccacgccatgaggttcaagagatggaacaaattttgcagaaagttggg
gaggatctcttgcctggggttactattatttgtggaggatcatatagacgtggaaaagct
acctgcggggacattgatatcattataacacatcctgatggaacaagtcacaaaggattt
ttgcccaggtttgtaaatcgtttaaaggatatgaatttcctgagggaggatttgattttc
agttctcacagtgaagagggcactgattctggtgttggcacatactttggtttttgcact
tatcctggacgggagttgcgacatcgtattgatttaaaggtttacccaagagacatatat
gctttcggacttgtagcttggaccgggaatgatgtattaaataggaggttgagacaacaa
gcagaatctaaaggattcaggcttgatgatacagggttatttccatccactcagggttct
ggcggcaaacggggaacaaaaggtactgcaaatatgaagttgtatacagaaagggaggtg
tttgatttcctgggcgttccttggcttgaaccacatgaaagaaatctctaa
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