Trifolium pratense (red clover): 123907182
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Entry
123907182 CDS
T08949
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03082
ATP-dependent chromatin remodeling
tpra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123907182
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123907182
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123907182
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123907182
03036 Chromosome and associated proteins [BR:
tpra03036
]
123907182
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123907182
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123907182
SWI/SNF complex
123907182
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123907182
PBAF complex
123907182
SWI/SNF complex
123907182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
123907182
NCBI-ProteinID:
XP_045813292
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All DBs
Position
LG2:38532116..38535613
Genome browser
AA seq
247 aa
AA seq
DB search
MKTPLSSFYRNPVKFRMPTSENLVPIRLDIEIDGHRYKDAFTWNPSDPDSEIVVFAKRTV
KDLKLPPPFVTQIAQSIQSQLAEFRSYDGQDMYAGDKILPIKLDLRVNHTLVKDQFLWDL
NNFDSDPEEFARIFCRDMDIQDPEVGPAVAFAIREQLYEIAIQSVVSARESRLSKKGRRG
ADFTPVSKGGAVAVDLVKLFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDLLEAKEERNFR
GSISNNI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccctctttccagtttctaccgaaaccccgttaagttcaggatgccaacttcg
gaaaacctagttcccattcgacttgacattgaaatcgacggtcatagatacaaggatgct
ttcacttggaacccttctgatccggattcagagattgttgtgtttgctaaaaggactgtt
aaagatttgaagctacctcccccttttgttactcagattgctcaatccattcaatctcag
ctagctgaatttcgatcctacgacggccaagatatgtatgctggagacaagattctcccc
atcaagctcgatcttcgtgtaaatcatacacttgtaaaggatcaatttttatgggacttg
aataatttcgatagtgatcctgaagagtttgcaagaatcttctgcagagacatggacatt
caggatcctgaggttggaccagctgttgcctttgccatcagagaacagctttatgagatt
gcaattcaaagtgtggtttcagcaagagaaagcagattaagcaagaagggtcgtcgaggg
gctgactttactccagtcagcaaaggaggtgctgtagcagtggacttggtcaagttattt
ggtattaaatcaagtgttgttcggaaaagaaaggagtgggatgtatatgaacccattgtg
gatcttctatccaatgaagaagttgatctccttgaagcaaaggaagagagaaatttcagg
ggatccatatcaaataatatttaa
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integrated database retrieval system
