Trifolium pratense (red clover): 123907188
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Entry
123907188 CDS
T08949
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123907188
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123907188
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HARP
Helicase_C_4
Motif
Other DBs
NCBI-GeneID:
123907188
NCBI-ProteinID:
XP_045813299
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Position
LG2:38580872..38589300
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AA seq
681 aa
AA seq
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MEPEDWDLSGEDLDSLEREAYQKIAQLRSNPTHPPSSSSHSANPPPPPPQRSLPPSFKSG
GGVTNNTNDHSKEFTKASVKFFLHSTGLIAAKFQYDQVIVAAFRKIPKSSWNAKERLWMF
PISSLSEAEKVLREISGYNVQVENLDPLVQRAITASTSAPDLRDRYDKIPSYVESKLLPF
QRDGIRFILQHGCRAFLADEMGLGKTLQAIAVAACVQDSWPVLILAPSALRLQWASMIQQ
WLNIPSSDILVVLSQSGGSNRGGFNIVSSSAKSSIHLDGLFNIISYDLVPKMQNTLMASD
FKVVIADESHFLKNAQAKRTTASLPIIKKAKYAILLSGTPALSRPIELFKQLEALYPDVY
KNVHEYGNRYCKGGVFGLYQGASNHEELHNLMKATSMIRRLKKDVLSELPVKRRQQIFLD
LADKDMKQINALFRELEMVKAKIKASKSQEEAESLKFTQKNLINRIYTDSAEAKIPAVLD
YVGTVIEAGCKFLIFAHHLPMIDAIHEFLLKKKVGCIRIDGGTPSGSRQQLVTEFQEKDA
IKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHRIGQVSSVNIYYLLAND
TVDDIIWDVVQSKLDNLGQMLDGHENTLKVSDSDDQPPLSSPAKQKTLDQFVRRCENNSS
GLEHQSTPKRPRYLPKGSVKW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagccagaagactgggatttgagcggcgaagacctcgattcccttgaaagagaagct
tatcagaagattgctcaactccgctccaaccccactcatcctccatcatcttcttctcat
tctgcaaaccctcctcctcctcctcctcaaagatcactccccccttcattcaaatcagga
ggaggagtgactaacaacactaacgaccattctaaagaattcacaaaagcctcagtcaaa
ttttttctccattccactggacttattgcagcaaagtttcaatatgatcaggtaatagtt
gctgcttttagaaaaatccctaaatcttcttggaatgccaaagaacggttatggatgttc
cctatatcttctttgtcagaagcagaaaaggttcttagagaaatatctggttataatgtt
caggtggagaacttagatcccttagtgcaacgtgctatcactgcttccacttctgctcct
gatcttcgagatcgatatgataagatccctagctatgttgaatcaaagcttttgccattt
caacgagacggtataaggtttatattgcagcatggatgtcgtgcttttttagcggatgaa
atgggactggggaaaacgttgcaggccattgctgtagctgcatgcgtccaggattcgtgg
cctgttcttatactagcaccatctgcattacgattgcaatgggcttctatgattcaacaa
tggctgaatattccttcatcagatatacttgttgtcttatctcaaagtggtggatcaaat
agaggaggtttcaacatagtatcttcaagtgcgaaaagcagcattcatctggacggacta
ttcaacattatctcgtatgatttggtgccaaagatgcaaaatacgcttatggcgtctgat
tttaaggttgtaattgctgacgagtcacactttctgaaaaatgctcaggcaaagaggaca
actgcttctcttccgattataaagaaagctaaatatgcaatattgcttagtggaactcct
gctttatctcgaccaatcgaactattcaaacagctggaagctttgtatcctgatgtgtat
aagaatgttcatgaatatggtaaccggtattgcaagggtggagtttttggactttatcaa
ggggcaagtaatcatgaagaattgcacaatttgatgaaggcaacatcgatgattaggagg
cttaaaaaggatgttctttctgaacttcctgtaaagcgtaggcaacagattttcctagac
ttggccgataaggacatgaagcaaattaatgctctatttcgcgagttggagatggtaaaa
gccaaaattaaggcttctaaatcacaagaggaggctgaatcactcaagtttactcaaaag
aatcttattaacaggatttatactgattctgcggaagccaagattcctgctgttcttgat
tatgttggaactgtaattgaggcaggttgcaagtttcttatatttgcacaccatctacca
atgattgatgcgatacacgagtttcttcttaaaaaaaaagttggatgcatccggattgat
ggaggtacaccttctggatcaaggcaacaattagttacagagtttcaggaaaaagatgct
atcaaggcagcagtgctatctatcaaagctggaggtgtcgggttaacgttgactgctgcc
agcacagtcatctttgcagaattgtcttggactcctggtgatctaattcaggccgaagac
cgtgttcatagaattggccaggtttcttcggtaaatatatactacttgcttgcaaatgac
acagttgatgatatcatatgggacgtagtgcaaagcaaactggacaatttggggcagatg
cttgatggccatgagaacaccttaaaggtctcagattcagatgatcagccaccattgagt
agccctgcaaagcagaaaacactcgaccaatttgtcagaagatgtgaaaacaacagtagt
ggattggaacatcagtcaacccccaaacgtcctcggtacttacccaaaggttctgtgaaa
tggtaa
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