Trifolium pratense (red clover): 123907198
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Entry
123907198 CDS
T08949
Name
(RefSeq) tRNA pseudouridine synthase A 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123907198
Enzymes [BR:
tpra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
123907198
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123907198
Prokaryotic type
123907198
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
123907198
NCBI-ProteinID:
XP_045813319
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All DBs
Position
LG2:complement(38656086..38663287)
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AA seq
328 aa
AA seq
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MMTYAAAAAAAALVAPFPSPSPSSTSLLSLNSAVDVVEVQHNQDSVYKWRLVLAYDGTRY
AGWQYQESPPTVQCAVEKALIQTTKLPRKDLQLVGASRTDAGVHAWGQVAHFVTPFNYEN
LDRVHMALNGLLPSDIRVRETSPASAEFHARFSVKSKIYHYKIYSDTIMDPFQRRFAYHN
MYKLNTAAMREAAKYFVGKHDFTSFENASHNDRVPDPVKHIFRFDVKEMGALLQLEVEGS
GFLYRQVRNMVALLLQIGKEAIPPDIVPYILASRDRKELAKYSFYLPPHGLCLVSINYNE
SHLLPPPDCPAKSFGMHHTIRKCKVVYY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttatgcagcagcagctgcagcagcagctctggttgctccgttcccatctcca
tctccatcttcaacttctcttctttctttgaattctgcagttgatgttgtggaagtgcag
cacaatcaagattctgtctataaatggcgcctcgttttggcttatgatggaacccgatat
gcaggctggcaatatcaagagtctccccctactgtacaatgcgccgtagaaaaagcttta
attcaaacaacaaagcttccaaggaaggatctccagttggttggtgcaagcaggactgat
gcaggagtccatgcttggggtcaggttgcacattttgttacaccatttaattacgaaaac
ttggatagagttcacatggctttgaacggtcttcttccttctgatatccgagttagagag
acaagccctgcatctgctgaatttcatgctcgtttttctgtaaaaagtaagatttatcat
tacaagatttacagtgataccatcatggacccgttccagcgccgttttgcttaccataat
atgtataaactcaataccgctgctatgagagaagctgcaaaatattttgttgggaagcat
gatttcacttctttcgaaaatgcatctcacaatgatcgcgtaccagatccagtgaagcat
attttccgattcgatgtgaaagaaatgggagctcttttgcagctagaagttgaaggctcg
ggtttcttgtatagacaagtccgaaacatggtggctttgttgcttcaaatcgggaaggaa
gcgatccctccagacattgttccatatattttggcaagtcgagatcgcaaggagctggca
aaatacagcttctatttgccaccacatggtctttgtcttgtttctatcaactataatgaa
agtcacctgttgcctccaccagattgccctgcaaaaagttttggtatgcatcataccata
agaaaatgcaaggttgtatactattga
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