Trifolium pratense (red clover): 123907223
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Entry
123907223 CDS
T08949
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123907223
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123907223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
123907223
NCBI-ProteinID:
XP_045813358
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Position
LG2:38856227..38860842
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AA seq
675 aa
AA seq
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MGIIVQVSPKPLYLLALRFNPVNHVLCNIYIIYVCIILTTWYLLWPGFESPGEWEDHHRI
FGVDGPDIQYTGAQDESFPYVYYTPSYGFAQSPYNPYNPYIPGAMVGVDGSFGGAQQYYS
IPDYQTPISSPSYIPLVQPDNFLDSYVDSSAYGSRPDGRGSKHKFNSASGAFTRNSSKPL
SNQTSSLARVPEGTRANALAKNDLTNGSVPNSGFLNLASSPYYQARSADVSFPSIDTISN
GNVLSHGNQLKVAAPLSNGFSDYGSNTNGQSAIAKFRPKFHVAKVPSDVNRSGDLLGEQN
RGPRVNRPKHHLAIKAYTTKAGEANTQESIVYTDQYNREDFPIDNENAKFFVIKSYSEDD
VHKSIKYNVWSSTPHGNKKLQSAYEDARRKASGKSGGCPIFLFFSVNASGQFCGVAEMVG
PVDFYKDMDFWQQDKWNGSFPVKWHIIKDVPNGNFRHIILENNEFKPVTNSRDTQEIMYR
KGLDMLKIFKSYTLKTSLLDDFMYYENRQKVMQEEKAKLGIKSFGSPLSVPVLEPPRKLN
YVFEIPAGSDEKNSKIDGELGSLKQTSISSAAHIVDSPDVTSTASVDEKVENGVDGQDIS
SVLKIGSVTISPKQVEAKPSNTDPISVVTVGSMQVRVNGFSKSSGALKVGSIPLDPKSLQ
AGKGTTTCIKTGPHP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggtattattgtacaggtaagtccaaaaccattgtaccttttggctttgaggtttaat
ccagtcaatcatgtgttatgtaacatatatataatatatgtatgcattatattgaccact
tggtatttattgtggccaggatttgaatcacccggtgaatgggaggaccaccataggatt
tttggtgtagatggtcctgacattcagtacacgggtgcgcaagatgaaagttttccatat
gtatattacacacctagctatggatttgcacagtccccatacaatccatataatccttat
attccaggtgctatggtaggagttgacggttcatttggaggagcacagcagtattactcc
atccctgattatcaaacccctatttcttcgccatcttatattcctcttgttcaaccagac
aattttctcgatagttatgttgactccagtgcttatggcagtagacctgatggaagaggc
tcaaaacataagttcaattcagcttctggtgcatttaccaggaactcttcaaaaccatta
tcaaatcagacaagttccttggccagggtacctgaggggacaagagctaatgctttagcg
aagaatgatttgacaaatggaagcgttcctaacagtgggtttcttaatttggcttcatct
ccttactatcaggctagaagcgctgatgtatcattcccgtctatagatactatttccaat
ggaaatgttttgtcccatggtaatcaattgaaagtagctgccccgttgagtaacgggttt
tctgactatggatcaaatactaatggacagtctgcaattgctaaatttcgaccaaagttt
catgttgccaaagtgccgagtgatgtaaatagaagtggtgatttattgggtgagcaaaat
cggggccctagagttaataggccaaaacatcatctggctatcaaagcctatacgaccaag
gcaggagaagctaacacacaagagagcatcgtttatactgatcaatataatagggaagac
ttccctattgacaatgaaaatgcaaagttttttgttataaaatcatacagtgaggatgat
gtgcacaaaagcattaaatataatgtgtggtcatcgacacctcatggaaacaagaagctg
cagagtgcttatgaagatgccaggagaaaagcttctggaaaatctggaggctgtcccatc
tttcttttcttttcagttaatgccagtggtcaattttgtggagttgctgagatggttggt
cctgttgacttctataaggatatggacttttggcagcaagataaatggaatggtagcttc
cctgtgaagtggcacatcataaaagatgtgccaaatggcaattttaggcacatcatacta
gagaacaatgagttcaaacctgtaactaatagcagagacacacaagagataatgtataga
aagggtctggatatgctgaaaatattcaaaagttacactttgaagacatctttgcttgat
gattttatgtactatgaaaaccgtcaaaaggtcatgcaggaggagaaagctaagttgggg
atcaagagttttggtagtccattatcagtaccagtgttggagccacctcgaaagctgaat
tatgtttttgaaattcctgctggcagtgatgagaaaaattcaaagatagatggtgaactt
ggtagcttaaaacagacttcaatttcaagtgctgcacatattgttgatagtcctgatgtc
accagcactgcgtctgtggatgagaaggttgagaatggtgttgacggacaagatatttct
tctgttctaaagattggttcagtcactattagtccaaaacaggtcgaggctaaaccatct
aatacagatcctattagtgttgtcacagtaggctcaatgcaggtcagagttaatggattt
tcgaagtcttctggtgctttaaaggttgggagtatcccacttgatccaaaatctctacag
gcaggcaaaggaacaaccacttgcatcaaaactggacctcatccttaa
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