KEGG   Trifolium pratense (red clover): 123907243
Entry
123907243         CDS       T08949                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123907243
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tpra01009]
    123907243
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123907243
Enzymes [BR:tpra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     123907243
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     123907243
Protein phosphatases and associated proteins [BR:tpra01009]
 HAD phosphatases
  Other HAD phosphatases
   123907243
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     123907243
SSDB
Motif
Pfam: PNK3P zf-PARP
Other DBs
NCBI-GeneID: 123907243
NCBI-ProteinID: XP_045813383
LinkDB
Position
LG2:39030093..39036929
AA seq 418 aa
MLHPHFPISYQHLYSHSHKITYKNIGRQAPRCRFTLPQQSATQNPPQLPISIHRRSPISL
ISVLSLGSRRIYAIFVNACSLPMAPSESVIVEYAKSNRSSCKKCSEAIQSKTLRLGLVSR
DKSRGFDVTKWHHLSCFPLPSFHSPPNTITGFSSLKSDDQEALTKLFAGQDNSEEECKAT
EDIQNEEKDTEESASKKRKLSTSDVKVGANIIFSASDVKSTYKDATLLPKWKAFQTVIFL
ERDDGLEDSSKIAAFDFDGCLANTSVKKVGPNAWSLMYSSIPDKLQSLYNNGYKLVIFTN
ESNIERWKNSRQKAVDSKIGRLNQFIEKVKVPIQVFIACGVGKSGKAGTKEDDPFRKPEP
GMWQLMEKYFNSGITIDMDQSFYVGDAAGRESDHSDADIRFAEANGLKFYVPEEYFAA
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgttgcatccccatttcccaatctcatatcagcatctctatagtcatagtcataaaata
acgtataaaaacataggccgtcaggcgccacgctgccggtttacccttccacaacagtca
gcaacacaaaatccaccgcaactccctattagcatccaccgtcgttctcccatctctctg
atttctgttctctctctcggctctcgcagaatttacgccatttttgtgaacgcttgttct
ctcccaatggcgccatccgagtcggttattgtggagtacgccaaatccaaccgttcttcc
tgcaagaaatgctctgaagccatacaatctaaaaccctaagattgggattggtctcaagg
gacaagagtagaggttttgacgttaccaaatggcaccacctcagttgcttccctctaccc
tcttttcactcccctcctaataccattaccggcttttcctccttgaagagcgatgaccaa
gaagctctgacaaagttatttgctggacaggacaattctgaagaggaatgtaaagcaacg
gaagacatacaaaatgaagagaaagatactgaagaaagtgcttcaaagaaaagaaaatta
tccacctctgatgttaaagttggggccaatataatcttttcagcttctgatgtgaagagc
acatacaaggatgctacccttttgcctaaatggaaggcattccagacagtcatttttctt
gaacgggatgatggtttggaagattcaagtaaaattgctgcatttgattttgatggttgt
cttgcaaacacttctgtgaaaaaagtaggtccaaatgcttggtccctcatgtattcctca
attcctgataaactccaaagcttatacaacaatggctacaagctggtaattttcaccaat
gaatccaacatcgaacgttggaagaacagcagacagaaagccgtcgactcaaaaattgga
cgtctaaatcaatttattgagaaagtgaaggtcccaattcaggtttttatagcttgtggg
gtaggtaaatcaggcaaagctggaaccaaggaagatgatccgtttcggaaaccagaacca
gggatgtggcaactcatggagaaatacttcaattccggcattaccatcgatatggatcaa
tccttttatgtcggcgatgcagctgggagagaatcagatcatagtgatgctgatattaga
tttgcagaggctaatggtttgaagttttatgtccctgaagagtactttgcggcatga

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