Trifolium pratense (red clover): 123907334
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Entry
123907334 CDS
T08949
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like 2
KO
K14411
RNA-binding protein Musashi
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123907334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123907334
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123907334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
123907334
NCBI-ProteinID:
XP_045813502
LinkDB
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Position
LG2:10370617..10378101
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AA seq
411 aa
AA seq
DB search
MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE
VLSGEHTLGNRTLEVKVATPKEEMRAPAKKATRIFVARIPQEVTEETFRSHFEKYGDITD
LYMPKDQGSKMHRGIGFITFANAESVENLMSETHELGGSAVVVDRATPKDDDIKPTARVS
GRMSQGGYGAYNAYISTATRYAALGAPTLYDRPGPIYGRGEPRRRISKKIFVGRLPPEAN
SEDLHQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAID
SATPVDDTEPSENFMMNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPGARPLRTDYQE
QIGRPSRVDYQEQIGRPSRVDYQEQIGRPSRVDYQEQIGRPSRADWRYRPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagaaagcttgtggttttggggatcccatgggatgttgataccgagggcttg
aaagaatacatgagcaaatatggtgaactagaagattgcattgtcatgaaggagcgttca
actggacgatctcgtggttttggatatgttacatttgcttcagtggatgatgccaaggaa
gtattgtcaggtgaacatactcttggaaataggacgctggaggtcaaggtggccacacca
aaggaggagatgagggcaccagccaaaaaagctaccagaatttttgtggccaggattcca
caagaagtaacagaagaaacttttagaagtcattttgagaaatatggtgatataacagat
ttgtacatgccaaaggatcaaggctcaaagatgcatcgtggaattggttttatcactttt
gcaaatgcagaatctgtggagaatttgatgtcagaaacccatgaactcggaggttctgct
gtagtggttgatcgagctacacctaaggatgatgacattaagccaactgccagagtgtca
ggcagaatgtcacagggaggatatggtgcatacaatgcatatatttctacagcaactaga
tatgcagcactcggagctcctactttgtatgaccgtcctggcccaatttatggaagggga
gagcctcgtcggagaattagcaaaaagatttttgttggtcgtctccctccagaagcaaat
tctgaggatctccatcagtattttggaagatttggccgtatagaagatgtttacattccc
agagatcctaagagaacaggtcacaggggttttggatttgttacttttgctgaagaaggt
gtagcagatcgtgtctctcgaaggtctcatgagatttgtggacaccaggtggcaatagat
tcagccacacctgttgacgatactgagcccagtgagaattttatgatgaacagtatggaa
tcttttgggggatatggtggtccagtgcgaagttatgggaggatgtatggtggtttagac
tacgatgattggggttatggagttcccggtgcgaggccattaagaacagattatcaagag
cagattgggaggccgtcaagagtagattaccaagagcagattgggaggccatcaagagta
gattaccaagagcagatcgggaggccatcaagagtagattatcaagagcagattgggagg
ccatcaagagcagattggaggtataggccatactag
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