Trifolium pratense (red clover): 123907651
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Entry
123907651 CDS
T08949
Name
(RefSeq) putative disease resistance protein RGA4
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tpra
Trifolium pratense (red clover)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
WH_DRP
LRR_RPS2
LRR_8
LRR_4
LRR_Zer-1
LRR_EndoS
NB-ARC
Rx_N
LRR_13
Motif
Other DBs
NCBI-GeneID:
123907651
NCBI-ProteinID:
XP_045813957
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Position
LG2:16816433..16820873
Genome browser
AA seq
1099 aa
AA seq
DB search
MDVVVLSETIGEILKHIDSLKTSSSSDSLKTTSSSGIGLLKGYINQVKVSLESIQSTVKI
LDVDVIDKEDDKVCLRNLKNAVNDLSDLVEDLYTDPNLPKQSSHSFFRSNSVKDRYKDVQ
SQIQDIVNLQESIAKLPKQASVKAWEDIKLNQTEIGREKEKKEIIDQLVSLQTKRKTETT
PEESHVVIIPVVTIVEFEVVENEELVHLICNDEKVKARFGSQIFVDGEIPQTDVINNDLT
NCKDYLVVVKNLKTENGEDVLEKLMTKLQERTIDGVKRAILITTRSKLMANNITTTTRRN
TGIYASFASFKPHVLRGLNENESWSLFKSIRGGDVEENGMERKIVMDCGGVPFWIKFTAE
FMKKPSGAATTEDVLKKEFLKELKLYYNKFPALQKMCFAFCSLFPRNHLIDVERLMHLWR
AEGFVMDVDVPTAEAKLRGCFNDLVEKPIFKDMEEDEGGIVTRCRMQPLMHDLARFVSDQ
EENITVDPEGERVHEGVLRASFDFSLDVSRGIPPSLFSKAENLRAILLWKTQTLLPKEGE
TSTSTCDLIFKTFKTTLRMLDLHDMGIKTIPNSIGEMNNLRYLNLSFNTMEKLPSAITKL
SNLQTLKLSQCYLLKELPKHIDQLTKLNHLEIDGCLALTHMPSKIRKLGESLQTLSLFVV
SKDDLGGLDDLKILNNLRGHLEISHLETPSLKLSRKDTYLNEKKHLKHLTLRWDHKDVLK
EKKGDNSTPYETTLDRLEPPTELTTFFLIGYKGKTLSDWFSSLKCLVKLTLYDCTNCTSL
PQLDQLAKLRFLELLRLDNLKCISKNTIADEKKATIYFPSLVELTISDCPNLTSWWTEHE
EAKNLPYLACLSKLHVSYCPKLICMPLFPDLDEELVLVGSSMKPLHDTIEPATDTITQGT
IRCAPFSKLKSLKISNVEQKPPQDPQNEWIKYFNSLEKLDIKEWKHSLPNGFRHLTSLQS
LNIESCQELDLDLISSTHEWEGLKNLCSLAIREIPKLEHLPSGVVKVTSLKDLELHNCHD
MTSLSEEIDGLKSLDRLVISNCNKLASLPKALEKMKHLKTLIILDCTLLLPRCQPVTGDD
WPQIKHIENKQVTETNRGL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagttgttctcagcgaaaccattggtgaaatccttaaacatatagattccctt
aaaacaagcagcagctcagattcccttaaaacaaccagcagctcaggcattgggttgtta
aaaggttacatcaaccaggtcaaagtttctcttgaatcaatccaatccacagtgaagatc
ctagacgtcgacgtcatagataaggaggatgataaggtctgcctacggaaccttaagaat
gcagtcaacgatctgagtgatttggtggaggatctctacacggatcctaatttgcctaaa
caaagctcacactctttctttagatccaattctgttaaggatcgctacaaagacgtccaa
tcacagattcaggatatagtgaacctccaagaaagtatagctaaattgcccaaacaggcg
tctgtaaaggcatgggaggatataaagttgaaccaaactgaaattggtagagaaaaggaa
aagaaagaaattatagatcaacttgtgtcgctccaaaccaaaagaaaaacagaaacaaca
ccagaggaaagccatgttgttattattcctgtggttaccattgttgagttcgaagtagtt
gagaatgaagaactcgtccatctcatttgcaacgacgagaaagtcaaagctcgcttcggc
tcacaaatttttgttgatggcgaaattccgcagacagatgtcatcaacaacgaccttaca
aactgcaaagactaccttgttgtggtgaaaaatttaaaaactgagaatggtgaagatgtt
ctggaaaagttgatgacaaagctgcaggagagaaccatagacggtgtcaagcgtgcaata
ctcataaccacacgcagtaaactcatggccaacaatattactactaccacacgtagaaat
actggtatatatgctagttttgcctcgtttaagccacatgttctccgggggctaaacgaa
aatgaatcttggtcactgtttaagagcattcgtggtggtgatgtcgaggagaatggaatg
gaaagaaaaattgtgatggattgtggcggagttcctttttggataaaattcactgcagag
tttatgaaaaaacctagtggtgctgccacaactgaagatgttttgaagaaggagtttcta
aaagagcttaagttatactacaacaaatttccagcgcttcagaagatgtgttttgcattt
tgttcattgtttcctcgcaatcatttgattgatgttgaaagattaatgcatctctggaga
gcagaaggatttgtcatggatgtagatgtaccaaccgcagaagcaaagttacgtggatgt
ttcaacgacttggttgagaagccaattttcaaagacatggaagaagacgagggtggtatt
gtgacaagatgtagaatgcaacctttaatgcatgatctagcacggtttgtatctgatcaa
gaagagaacattacggtggacccagaaggggaaagagttcatgaaggagtcctacgagca
tcatttgatttcagtttggacgtttcacgtggaattccaccttctttgttttcaaaagca
gagaatctcagggctattctcttgtggaagacacaaacattgcttcctaaggagggagaa
acgagcacttccacttgtgatctaatcttcaaaaccttcaagaccactctccgaatgttg
gatctccatgacatgggaattaagacaattcctaactctattggggaaatgaataatttg
aggtatcttaacctttcctttaataccatggagaagctacctagtgccattaccaaactt
tccaatttgcaaactttgaaactatcccagtgttatctcctcaaggaattaccaaagcat
attgaccaactaactaaactcaatcatcttgagatagatggatgtttggctctcactcac
atgcctagcaaaatacgaaagttgggagaatctcttcagacattgtcactatttgtggtt
agtaaggacgacttgggtggccttgacgaccttaaaattctcaacaacttaagaggccac
ttggaaatttctcatcttgaaacacccagtttgaagctttcacggaaggatacttatctc
aatgagaaaaaacaccttaaacatctaacgttgagatgggatcacaaggatgtcctgaag
gagaagaagggagataatagtactccatatgagaccacacttgaccgtcttgagcctccc
actgaactgacaacatttttccttatagggtataaaggtaaaactctttcagattggttt
tcttcattaaagtgccttgttaagttaaccttgtatgactgcaccaattgcacatctctt
ccgcaacttgatcaacttgcaaagcttagatttctagaacttctaaggttggacaatctg
aaatgcatttctaaaaataccattgcagatgaaaaaaaagctacaatatactttccatct
ctagtggaactcacaatctcagattgccctaatcttacgagttggtggacagagcatgaa
gaggccaaaaatttaccctatttggcttgcctttcaaagttacatgtaagttactgccct
aaactaatttgcatgcccctttttcctgatcttgatgaagagctagttctcgtgggttca
agcatgaaaccgctacatgatacaatagaaccagcaactgatacgataacacaaggaact
ataagatgtgctccattttccaaactcaagtccctgaaaatttcgaatgttgaacagaag
cctcctcaagatccacaaaacgagtggatcaaatacttcaattctctagagaaacttgac
attaaagagtggaaacattctcttcccaatggttttcgtcatcttacgtcactccagagt
cttaacattgagagttgtcaagaacttgatcttgacctgatctcaagtactcatgaatgg
gaaggtctgaaaaacttgtgttctcttgccataagagaaattccaaaacttgagcatctt
ccgtcgggtgttgtcaaggtaacgtctcttaaagatcttgaacttcataattgtcatgac
atgacttctttatccgaagagatagacggccttaaatcacttgatagattggtgatttct
aattgcaacaagttggcttcgcttccgaaagcattagaaaagatgaagcatttgaaaact
ttaatcattttggactgcactttgttattgccaaggtgtcagccagttaccggtgatgat
tggccacaaattaagcacatagaaaataaacaagtcactgaaacgaatcgaggactttga
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