Trifolium pratense (red clover): 123907660
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Entry
123907660 CDS
T08949
Name
(RefSeq) putative disease resistance protein RGA4
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123907660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
LRR_RPS2
WHD_DRP
LRR_8
LRR_4
NB-ARC
LRR_13
LRR_At1g61320_AtMIF1
DUF815
LRR_EndoS
Snapin_Pallidin
LRR_Zer-1
LRR_1
Rx_N
YkyA
Mod_r
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
123907660
NCBI-ProteinID:
XP_045813968
LinkDB
All DBs
Position
LG2:16959485..16963705
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AA seq
1082 aa
AA seq
DB search
MDLVLLSETIDDILEHIPSLETTSSSSIEVSKTNIEGLKKALQIIQPVLKNLHLQDKEAL
ASLRNLKNAINDLTDLLEELSTDYALPQRSKLSFFKTINPHKDRLKVVNTKIKNVIEVLQ
QVTDELITTTTFMPTPYQEAHEKIQDIELEPDTVGRQKEKKQIIDQLMSFHTNTGASDVV
PIPVVTIVGFAGIGKKQLVRLICQDKEVKAHFGLITRVRDVKSFEKCVSDKSLMNGKHYL
VVMEDVETEIGEKDLKMLQVILAGGESAILVTTSSKLVANNITAILRSNNNIATSFTSFR
PHVLQELDERESWSLFWRIRGPSSIDIMGEIEWKIVMDCGGIPLLIKFAAEFLNNRRVAI
DVDNLREEFLKKLKFEYYDKLTRLHKMCFAFCSLFPRDHLIDVKRLIHLLKAEGFLMDAN
NTTVEENLSRYFNDFLRKPIFTYIEEDMYGVVRKLRMQPLMHDLACLVSDQEENIKVDPE
GEKVCEGVLRASFGFRFDVSRGIPPSLYEKAKKLKAILFWKKQTLLAKEVKMSSSICDKI
IKYFKSTLRMLDLHDMGIKTLPASIGKMNSLRYLNLSFNSLEKLPSSITKLSNLQTLKLS
QCYLLKELPTNIDELTNLNHLEIDGCLALTQMPRKIHNLNNSLQTLTSFVVSKGCHLGGL
GDLAKLNNLRDHLEISHLEISGLNLSKNDDYLKGKKHLQHLTLRWDHEDGEEGDSSTRDM
TTLECLEPHSELRAIFLVGYKGKTLSTWFCSMQSLVKLSLRDCTGCIYLPRLDQLPKLRF
LELLRLDNLQYIVKENGGDNDIDKQGIEVYFPSLEELTILDCPNLKGWWENAKTGKQLPF
FACLSKLHVYYCPKLISMPLFPGLDEELVLVGSSVKPLINSIVYSTRYNPFSKLKYMKIS
SIEESGSPPERWIKYINSLEKLDIKDWKHLQSLPKGFGNLASLQSLNIENCQELDLDRSY
NEWKGLKNLCSLIITENPKLSSLPFGVDKVTSLQVLQLRNCPRMTSLPETIDNLKSLEKL
VISECDMLASLPKALINMLSMHTLIILDCTLLLPRCQPDIGDDWPQIARIQNKQIMKTNL
NM
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggatttagttcttctcagtgaaaccattgatgatatccttgaacatataccttccctt
gaaacaaccagcagctcaagtattgaggtgtccaaaaccaacattgaagggctcaaaaaa
gctcttcaaataattcaaccagtgctcaagaacctacacctccaagacaaggaggctctt
gcctcgctacggaaccttaagaatgccatcaacgatctaactgatttgttggaggaactc
tccacagattatgctttgcctcagcggagcaaactctctttcttcaaaaccatcaatcct
cataaggatcgcctcaaagtcgttaacacaaaaattaagaatgtcatagaggtcctccaa
caagttacagatgaattgatcaccacaaccacattcatgcccacaccatatcaagaagca
catgagaagattcaggatatagagttggaaccagatacagttggaagacaaaaggaaaag
aagcaaattatagatcaacttatgtcattccacacaaatactggggcaagtgatgttgtt
cctattcctgtggttaccattgttgggttcgcaggaatagggaagaaacaactcgttcgt
ctcatttgccaggataaggaagtaaaagctcactttggcttgataactcgagttcgtgat
gtgaaatcttttgaaaaatgtgtttctgacaagtcacttatgaacggaaaacactatctt
gttgtgatggaagatgttgaaactgagattggtgagaaagatctgaagatgttgcaagtg
atattagctggtggtgagagtgcaatactcgtaaccacaagtagtaaacttgtggccaac
aatattactgctatactacgtagcaataacaatattgccactagttttacctcgtttagg
ccacatgttttgcaggagcttgacgaaagggaatcatggtcactcttttggaggattcgt
ggaccaagttcaattgatatcatgggggaaatagaatggaagattgtgatggattgtggt
ggaattccgttgttgataaaatttgcagcagagtttctgaacaatcgcagagttgctata
gatgtagacaatttgagggaggagtttctaaaaaagcttaagtttgaatactacgacaaa
cttacaagacttcataagatgtgttttgcattttgttcattgtttcctcgtgatcatttg
attgatgtcaaaagattaattcatcttttgaaagcagaaggatttctcatggatgcaaat
aatacaaccgtggaagaaaatttaagcagatatttcaacgatttccttcgtaagcctatt
ttcacatacattgaagaagacatgtatggtgttgtgagaaagcttagaatgcaaccttta
atgcatgatctagcatgtttggtatcagatcaagaagaaaacattaaggtagatccagaa
ggggaaaaagtttgcgaaggagtcttgcgagcatcatttggtttcagattcgatgtttca
cgtggaattccaccttctttgtatgaaaaggcaaagaaactgaaggctattctcttctgg
aagaaacaaacgttgcttgctaaggaggtaaagatgagctcttcaatttgtgataaaatc
atcaaatacttcaagtctactctccgaatgttagatctccatgacatgggaatcaaaaca
ttgcccgcctctattgggaaaatgaacagtctaaggtatcttaacctttcctttaatagt
ttagagaaacttcctagttcaattaccaagctttccaatttgcaaactttgaaactatcc
cagtgttatctccttaaggaattacccacaaatattgatgaactaaccaacctcaatcat
cttgagattgatggatgtttggctctcactcaaatgcctagaaaaatacacaatctaaat
aattctcttcaaacactgacatcatttgtggttagcaaggggtgccacttgggtggtctt
ggggaccttgcaaaactcaacaacttaagagaccacctggaaatttcccatcttgaaata
tctggtttgaacctttcaaagaatgatgattatctcaaaggcaaaaaacaccttcaacac
cttacattgagatgggatcacgaggatggcgaggagggagatagtagtactagagacatg
acaacacttgaatgtcttgagcctcactctgaactgagagcaattttccttgtaggatat
aaaggtaagacgctttcaacttggttttgttcaatgcaatcccttgttaagttaagccta
cgcgactgtaccggttgcatatatctaccacgacttgatcaacttccaaagcttagattt
ctcgaacttttaaggttggacaatctgcaatacattgttaaagaaaatggtggtgacaat
gacatagacaaacaaggtattgaggtttactttccatccctagaggaactgacgatctta
gattgccctaacctcaaaggttggtgggaaaatgcaaaaacaggaaaacaattaccattt
tttgcttgcctttcgaaattgcacgtgtattattgtccgaaactaatttcgatgcccctt
ttccctggtcttgatgaagagctagtcctcgtgggttcaagcgtgaaaccactaataaat
tcaatagtttatagcacaaggtataatccattttccaaactcaaatacatgaaaatttcc
agcatcgaggagagtggatcaccaccagagaggtggatcaaatacattaattctcttgag
aaacttgacataaaagattggaagcatttacagtctttacccaaaggttttggtaacctt
gcctcactccaaagtcttaacattgaaaattgtcaagaacttgatcttgaccgctcatac
aatgaatggaagggtctaaaaaacttgtgttctctcatcataacagaaaatccaaaactc
agctctcttccatttggtgttgacaaagtaacatctcttcaagttcttcaacttcgcaat
tgtcctcgaatgacttctttgcctgaaaccatagacaacctcaaatcacttgaaaaattg
gttatttctgaatgtgacatgttggcttctcttccaaaagcattgataaacatgttgtct
atgcatactttgatcattttggactgcactttgttgttgccaaggtgtcagccagatata
ggtgatgattggccacaaattgctcgcatacaaaacaaacagattatgaaaactaatcta
aacatgtag
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integrated database retrieval system
