Trifolium pratense (red clover): 123907714
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Entry
123907714 CDS
T08949
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00270
Cysteine and methionine metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
123907714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123907714
03032 DNA replication proteins [BR:
tpra03032
]
123907714
03036 Chromosome and associated proteins [BR:
tpra03036
]
123907714
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tpra02048
]
123907714
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
123907714
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123907714
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
123907714
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123907714
Prokaryotic defense system [BR:
tpra02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
123907714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
123907714
NCBI-ProteinID:
XP_045814038
LinkDB
All DBs
Position
LG2:complement(56093921..56103271)
Genome browser
AA seq
1553 aa
AA seq
DB search
MGSASLLNSSDSSQQGVKDNNSIEEPVASNTQEEVMAGGKQKKRGLSESSEQPAPTRKMP
KRSVSAARKNLKEQTFSISDKSSLIETKQDQIVEEEFLAVRMTAGQDDGRPNRRLTDFIL
HDETGAAQPLEMLEINDLFITGLILPLEGSVDKKKEEGVRCEGFGRIESWDISGYEDGSP
VIWISTDIADYDCQKAAASYKKYYDHFFEKARACLEVYKKLAKSSGGDPDISLDELLAGM
ARSMSGSKYFSGTASLKEFIISQGEFIYKQLIGLELKPNDKGFEDIPALIALREESNKQA
NFASAQVMPSNATLRIGSGTAGEEKKNHMDSVDEEDEDAKLARLLQEEEDWKSRKQRKNP
RSSSSSNKFYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDVYDIEDLPRSMLHN
WALYNSDSRLISLELLPMKPCSEIDVTIFGSGLMTADDGSGFNLDTEAGQSSSASGAQAT
DGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYTPWYDTVLKTARIAISII
TLLKEQSRVSRLSFADVIKKLSEYKQDHKSYISTDQMAVERYIVVHGQIILQLFAEFPDD
KIRKSAFVIGLAKKMEERHHTKWLVKKKKVMPRSEPNLNPRAAMAPVVSKRKAMQATTTK
LINRIWGEYYSNHLPEDLKEGTNSEVKDDDEVDEQEQEENEDADADEEETVLLEGTQKPH
SVSKETKAFSDEREIRWEGDPEGKTSSGCLLYKQAIIHGEVVSVGISVSVEVDESDELPD
IYYIEYMFEAKNGRKMFHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQDVKQTNVVS
IQKMPWGHHYRKDNIVADKLDRERAEERKKKGLSTEYYCKSLYWPERGAFFSLPFDKLGL
GSGFCQSCKLEEAEKEKQIFKVNSSKSSFVLEGTEYSLNDYVYVSPFEFEERIEQGTHKS
GRNVGLKAYVVCQVLEIIVKKETKQAEIKSTELKVRRFFRPEDVSSEKAYCSDVQEVYYS
DETYTISVQSIEGRCEVRKKIDVPEGCAPGGIFHNVFFCEHLYDPATGSLKKLPANIKVK
YSSGHTAEAAARKKKGKCREGDSISEPDLERKTSNDKRLSTLDIFAGCGGLSEGLHQSGV
SSTKWAIEYEAPAGNAFKANHPEALVFIDNCNVILRAIMEKCGDIEDCISTTEAAELASK
LDEKDLSSLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILAFLSFADYFRPRY
FLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPED
VLPEWPEPMHVFSAPELKIKLSENVQYAAVRSTANGAPLRAITVRDTIGELPAVGNGASR
TNMEYQSDPVSWFQKQIRGNMAVLTDHISKEMNELNLIRCQKIPKKPGCDWRDLPDEKIK
LSNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDR
ILTVRECARSQGFPDCYQFSGNIIHKHRQIGNAVPPPLAFALGLKLKEAVDRT
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgcttctcttctcaattcttccgattcatcgcaacaaggtgttaaggacaac
aatagtatagaggaacctgttgcttcgaacacccaagaggaagttatggctggtggaaaa
caaaagaagcgaggtttgtcagagagcagtgagcagcctgctcctactcgtaaaatgcca
aagcgatcagtgagtgctgcacgcaaaaatttgaaggagcagactttttccatatccgac
aaatcttctcttattgaaacaaagcaggatcagattgtagaagaagaatttctagcagtc
cgtatgactgctggacaggatgatggccgtccgaatagaagacttacggactttatcctt
catgatgaaactggtgcagcgcaaccacttgagatgcttgaaatcaacgatttattcatc
actggacttatattgccacttgaaggaagtgtagacaagaaaaaagaggaaggtgttaga
tgtgaaggatttggacgaattgagtcgtgggatatatctggctatgaagatggctctcca
gtgatatggatttccactgatattgctgattatgattgccagaaagcagctgcaagttat
aaaaaatattacgatcatttctttgaaaaggcacgtgcttgcttagaagtatacaaaaaa
ctagcaaagtcttctggtggagaccctgacataagtcttgacgagttacttgctggcatg
gcacggtcaatgagtggtagcaagtacttttctggaactgcgtctttaaaggagttcatt
atttctcagggcgagtttatttataagcagctcattggtttagagttgaagccaaatgac
aaggggtttgaagacattcctgctctgattgctcttagagaggaaagcaataaacaagca
aactttgcaagcgcacaagtgatgccatcgaatgcgactttaaggattggttcgggaact
gcaggtgaggagaaaaagaatcatatggattctgtagatgaagaagacgaggatgcgaag
ttagcgcgactattgcaggaagaagaggattggaaatctcggaagcagaggaaaaaccct
aggtcatcctcttcatctaacaaattctatatcaaaattaatgaagatgagatcgctaat
gattaccctctccctgcttattacaaaacttctcttcaagaaacagatgagtttattgtt
tttgataatgactatgacgtgtatgacattgaagatcttcctagaagcatgctgcataat
tgggctttatacaactctgattctagattgatttctttggaacttcttcctatgaaacct
tgctcagagatagatgttacaatctttggatcaggcctaatgacggcagatgatggaagt
gggttcaatcttgatacagaggcaggccaatcttccagtgcttccggagcacaggccacg
gatggaattccaatttatctgagtgccataaaggaatggatgattgaatttggatcgtct
atggttttcatatccatccgaacagatatggcctggtataggcttggaaaaccgtcaaag
cagtacactccttggtacgacaccgtattgaaaactgcaaggattgctataagcattatc
actttgttaaaggagcagagccgtgtatcgagactttcctttgcagatgtcataaaaaaa
ttatctgaatataagcaagaccataagtcctacatttctactgatcaaatggctgttgag
agatacattgttgtccatggacagataattctgcaactgtttgcagaatttccagatgac
aagatcaggaagtctgcttttgtgatcggtcttgctaaaaaaatggaagaacgacaccat
accaaatggttagtgaagaagaagaaagtgatgccaaggagtgagccaaatttaaatcct
agggcagcaatggctcctgttgtatccaaaaggaaagctatgcaagctacaaccacaaag
ctgatcaatagaatatggggagagtattactcaaaccacttgccggaggatttgaaagaa
ggaactaatagtgaagtaaaggatgatgatgaagtcgatgaacaagaacaggaagagaat
gaagatgcggatgcggatgaggaggagacagtactgttggagggaacacaaaagccgcac
tcagtttccaaagaaactaaagcattttctgatgaaagagaaattagatgggaaggggat
cctgaagggaagaccagttccggatgccttctttataagcaggcaattattcatggtgaa
gttgtttctgttggaatatctgtgtcagttgaagttgatgaatctgatgaacttcctgat
atatattacattgaatatatgtttgaagcaaagaatgggagaaaaatgtttcatggtagg
atgatgcagcatggttgtcagactgttcttggcaacgctgccaatgagagagaggtgttt
ttgactaatgagtgcagggatttgggacttcaggatgttaagcagacaaatgttgtaagc
atccaaaaaatgccttgggggcatcattatcgaaaggataatattgttgcggataaactt
gatagggagagagcagaagaaaggaaaaagaaaggactatctactgaatattactgtaaa
agcttgtactggcctgaaagaggtgctttcttcagccttccatttgataagctgggccta
gggtctggcttctgtcaatcttgcaagttagaggaagctgaaaaagagaaacagattttc
aaagtaaattcatcaaagtctagttttgtattggagggaacagaatattctctcaatgac
tatgtttatgtcagtccttttgaatttgaggaaaggatagagcaggggactcataagagt
gggaggaatgtagggttgaaagcttatgttgtgtgccaagtgcttgagatcattgtcaaa
aaggaaacaaaacaagctgaaataaaatctacagagctcaaagtcagaagattcttccga
ccagaagatgtatcaagtgagaaggcatactgctctgatgtacaagaggtgtattacagt
gatgaaacgtatacaatctctgtacaatccatagagggtagatgcgaagtcaggaaaaag
attgatgtccctgaaggatgtgcccctggaggaatcttccataatgtctttttctgcgag
cacttgtatgatcctgccactggatccctcaagaagttgccagctaatattaaagtcaaa
tattctagtggacatacagctgaggctgctgctagaaagaaaaagggaaaatgtagagaa
ggagatagcatttcagagcctgatcttgaaagaaaaacatcaaatgataaacggttatca
accttggacatatttgcaggatgtggtggcttatcagaggggctgcaccagtcaggtgtt
tcatcaactaaatgggctattgagtatgaagcgccagctgggaatgcatttaaagctaac
catcctgaagcattggtatttattgacaattgtaatgttattcttagggctataatggag
aaatgcggggatatagaagattgtatctcaacgactgaggctgcagaattggcctctaaa
cttgatgagaaggatttgagtagcttacccttgcctgggcaagttgatttcattaatggg
ggtcctccatgccagggtttctcaggaatgaatcgatttaacacaagcacttggagtaaa
gtccaatgcgagatgatattagcattcttgtcatttgctgattatttccggccaagatat
ttcttgttggagaacgtgaggaattttgtgtctttcaataaaggacagacgttccgttta
actttggcatcacttcttgagatgggttatcaggtgaggttcggtatccttgaggctgga
gcttttggtgtttcacagtcacgaaaaagggcattcatatgggctgcctctccagaagat
gtgcttcctgagtggccagaaccaatgcatgtcttttctgcccccgaattgaaaatcaaa
ttgtccgaaaatgtccagtatgctgctgttcgcagtactgcaaatggtgccccgttacgt
gcaataacggttagagataccattggtgaactcccagctgtaggcaatggagcctctagg
acaaacatggagtatcaaagcgatcctgtttcctggtttcaaaagcagattcgaggcaat
atggctgtgctgaccgatcacatatcaaaggaaatgaatgagctgaacttgattcgttgc
cagaaaattcctaagaaaccgggttgtgattggcgtgatcttccagatgaaaagataaaa
ttgtctaatggacaactggttgatttgataccatggtgcttgccaaacacagctaaaagg
cataatcaatggaagggtctctttggtaggttggattggcaagggaatttcccaacttcc
attactgaccctcaacctatggggaaggttggaatgtgcttccatccagaccaagatcga
attctcacagttcgtgaatgtgcccggtctcaaggcttcccagattgctatcagttttct
ggaaacattatacacaagcacaggcagattggaaatgctgttcctcctccccttgcattt
gctttagggttgaaactcaaagaagcagtggacagaacatag
DBGET
integrated database retrieval system
