Trifolium pratense (red clover): 123907783
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Entry
123907783 CDS
T08949
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123907783
03036 Chromosome and associated proteins [BR:
tpra03036
]
123907783
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123907783
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123907783
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123907783
microRNA pathway
RISC loading complex
123907783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
123907783
NCBI-ProteinID:
XP_045814112
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Position
LG2:complement(50318921..50328850)
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AA seq
902 aa
AA seq
DB search
MVSVSGFEEVVEPPALPPSPPDVLPDMETEQIALPTYSIISRPGVGTTGKRIALLVNLFK
VAADATDATFFQYSVTITSEDKRVIENKGIGRKLIDKLHQTYSSELGGKSFVYDGDRTLY
TVGPLPDNKFEFTVLLEESFAKHSSTECPGADGSPHGENKRSKRSFPPKAFTVEISFSAK
IPLQSIALSLKGIESYANSQDALRVLDTILRQRAANRGCLLVRQSFFHDDSKNFIDVGGG
VTGVRGFHSSFRLTQGGLSLNMDVSTTMIVKPGPVIDFLLTNQSVREPRYIDWAKAKRML
KNLRVRATHRNQEFKISGLSEKPCIQQLFSLKMKNGEDSNAEKTVDVTVYEYFAKHRGIE
LTSSAYLPCLDVGKPNRPIFLPLELCSLLPLQRYTKALSPVQRASLVEKSRQKPQERIKI
LTNAIGNSCYDDDAVLTACGISIDKQFTPVEGRVLETPKLKVGKNEDCFPNNGRWNFKNK
TLLQPSHIEYWAVVNFSAQCDTSYITRELIKCGMSKGINIERPFTLIEEEAQMRKSNPVA
RVEKMFELLISKLTKRPKLILCVLPERKNCNIYGPWKRKCLSEIGVVTQCISPLKITDQY
LTNVLLKINSKLGGINSLLAIEHSGNLTLLKDTPTMILGMDVSHGSPGRSDIPSIAAVVG
SRCWPLISRYRASVRSQSPKVEMIDALFKPLGDGIDDGIIRELLLDFYHTSNHKPTQIIL
FRDGVSESQFQQVLNIELNQIIKAYKYIDGVDVPKFTVIVAQKNHHIKLFQANALENVPP
GTVVDTKIVHPRNYDFYMCTHAGMIGTSRPVHYHVLLDEIGFSPDGLQNLINSLAYVNQR
STTATSIVAPICYAHHAAAQMRQFLNFDELSEASLSPDSEGNIPIPELPRLHTDVNTSMF
FC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgtctctggctttgaagaagttgttgagccaccagctttacctccatcacct
cctgatgtgcttcctgatatggaaacagaacaaatagctctcccaacctattctattatc
agtaggcctggtgttgggaccacaggaaagcgcatagctttgcttgtaaacctcttcaaa
gttgctgctgatgctacagatgcaacctttttccagtatagtgttactatcacttcggaa
gataaaagagtcattgaaaacaagggcatcgggagaaaactgattgataagcttcaccaa
acatactcttctgaacttggtggaaaaagctttgtgtatgatggagatagaactttgtac
acagtcggtcctcttccagataataaatttgagttcacagtattacttgaggaatcattt
gccaagcacagcagtactgagtgtcctggtgctgatggaagccctcatggggaaaataaa
aggtcaaaacgttcttttccgccaaaggcattcacagtggagataagtttttctgccaaa
atacccttgcaatccattgctctttcccttaaagggattgagtcatatgctaattctcag
gatgcattgagggtgcttgataccatactgaggcagcgagcagctaacagagggtgtctc
ttggtaaggcaatctttttttcatgatgactcgaagaatttcattgatgttggaggtgga
gtaacaggagttcggggtttccattccagttttcgtcttacacagggaggattgtctctt
aatatggatgtgtccacaacgatgattgtaaaacctggacctgtaattgattttctccta
accaaccagagtgtgagggaacctcgttatattgactgggcaaaggccaagagaatgctt
aaaaatttaagagttcgtgctactcatcgtaatcaagaattcaaaatttctggcttgagt
gagaaaccctgcattcaacaactttttagtttgaagatgaaaaatggagaagacagtaat
gcggagaagacagttgatgttactgtgtatgagtattttgctaaacaccgtggcattgag
cttacctcttctgcttaccttccatgtcttgatgttgggaagccaaatcggcccatcttt
ttacccctggagctatgttcacttcttcccctccagcgttatacgaaggcattatctcct
gtgcaaagagcatctttagttgaaaaatcacgccaaaagcctcaagaaagaatcaaaatt
ctgacaaatgctataggaaattcttgctatgatgatgatgctgttcttacggcatgtggc
atttctattgacaaacaattcactccagttgaaggtcgggttcttgagacaccaaaatta
aaggtgggtaagaatgaggactgcttccctaataatggaaggtggaactttaaaaacaag
acacttctacaaccatcacatattgaatattgggctgttgtcaacttttctgcacaatgt
gatactagttacataacaagggagctgatcaaatgtggaatgagcaagggaattaatatt
gaacggccatttactttaatagaggaagaagcacaaatgagaaaatctaacccggttgca
agggttgaaaagatgtttgaactgctgatatcaaaacttactaaaagaccaaagttgatt
ctttgtgtcttgccagagaggaaaaactgcaacatatatgggccctggaaaaggaagtgt
ctgagtgaaattggggttgtcacacagtgtatttcccctctcaagatcactgaccagtac
cttaccaatgtacttcttaaaataaattctaagcttggtggaataaattctttgctggca
attgagcattctgggaatcttaccttgcttaaagataccccaacaatgattttagggatg
gatgtctctcatggttcccctggccgatcagatattccatccatagcagctgttgttgga
tctcgatgttggcctctaatttcgaggtatagagcatctgtgagatcgcagtcacctaag
gttgagatgattgatgctctattcaagcctttgggtgatggaattgatgatggtattatc
agggaattgcttctagatttctatcatacaagtaatcacaaaccaactcaaattattctc
ttcagggatggagttagtgaatcacaatttcaacaggttttgaatatagagcttaaccag
ataataaaggcctataaatatattgacggggttgatgttcccaagttcactgtaattgtg
gcacagaagaatcaccatataaagctgtttcaagctaatgctcttgaaaacgttcctcct
gggacagttgtcgacacaaaaattgtgcatccaagaaattatgatttctacatgtgtact
catgctggaatgattggaacgtctaggcctgtacattatcatgtgttgcttgatgaaatt
ggattctcaccagatggcttgcaaaatttgatcaattcgctggcttatgtgaaccaaagg
agcactactgcaacctcaattgtggcacctatatgctatgcccaccatgctgcagctcaa
atgcgacagtttctgaatttcgatgagttatcagaagcatctttgagtcctgattctgag
ggaaacatcccaattccagaacttccaaggttgcatacagatgtcaacacctctatgttc
ttctgttga
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