Trifolium pratense (red clover): 123907866
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Entry
123907866 CDS
T08949
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123907866
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123907866
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123907866
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123907866
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
123907866
Ion channels [BR:
tpra04040
]
Chloride channels
Chloride channel (CLC)
123907866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
123907866
NCBI-ProteinID:
XP_045814243
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Position
LG2:74215490..74225143
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AA seq
798 aa
AA seq
DB search
MLANHIQNGIESARVAWSRIPNSDESQFVDHDGVGLLKKNDGSAVESLDYEVIENFAYRE
EQAHRRRKLYVSYLLVVKWFFALLIGICTGLAAVFINISVENFAGWKYSVTFNIIQKSYV
AGFIVYILINLVLVYSSVYIITQFSPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKVFG
SIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFNVFKSDRDRRDLVTCGC
AAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHF
GSGGFIIWDVSDGQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGNR
VKIIEACLVSLLTSVISFGLPLLRKCSPCPEPDPTSGIECPRPPGMYGNYVNFYCSKDNE
YNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFVPG
IMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLK
LLPLIMLVLLISKAVGDAFNDGIYEEQARLRGIPLLESKPKYEMRNMIAKEACGSGRVVS
FPRVVKVSDVFSILQSNTHNGFPVIEHTRSGEPLVIGLVLRSHLLVILQSKVDFQHSPLP
SDPRAGGRSIRHDSGEFAKPVSSKGICLDDIHLTSEDLEMYIDLAPFLNPSPYIVPEDMS
LTKVYNLFRQLGLRHLFVVPRPSRVVGLITRKDLLIEDAENVNTLELRATSVRTLHQNKR
LTARNADVERPLLNGLLS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgaatcatatccaaaacggcatcgaatcagcgagggtagcttggtcacggatt
ccgaactccgatgaatcacagttcgttgatcacgacggtgttggtcttcttaagaagaac
gatggaagtgctgttgagagtcttgactatgaagtcattgagaattttgcttatcgagaa
gaacaggcgcatagaagaaggaagctgtatgtgagttacttgctggtggtgaaatggttc
tttgcgttgctcattggtatttgtactggacttgctgctgttttcatcaatatttcggtt
gaaaattttgctggctggaagtactcagtgacatttaatataattcagaaatcatacgtc
gctggctttattgtatatatcctgatcaacttggttttagtgtattcctctgtatatatc
atcacacaattttcaccagcagctgccggatctggtattcctgaaatcaagggttactta
aacggagttgatactcacggcatccttcttttcagaactttgattggaaaggtatttgga
agcattggttcagtggggggaggcctcgctttgggtaaagaaggtcctctagtccatact
ggtgcttgtattgcttctttgcttggacaaggtggatccactaaatatcatctaaattca
aggtggtttaatgtattcaaaagtgaccgggatcgccgtgatcttgtaacttgtgggtgt
gcagctggagttgctgctgcatttagagctccagttggtggcgtattgtttgcattggaa
gaggttacatcttggtggaggagtcaattaatgtggcgtgtctttttcacttctgctatt
gtggctgttgtggtgcgaactgcgatggggtggtgtaagagtggaaaatgtggacatttt
ggatcaggcggattcataatttgggatgtatcagatggtcaagaggattactcgtttgca
gagctgttaccaatggctattattggggttattggaggtctactaggagctttatttaac
cagcttacgctttatattactacttggcgtcgaaatcatcttcacaagaaagggaaccga
gtcaagattattgaagcatgccttgtctcccttctaacatcagttatttcatttggcttg
ccgcttctaagaaaatgcagtccatgccctgaacctgatcctacatctggtattgaatgt
ccaagacctcctggaatgtatgggaattatgttaatttctattgtagcaaagacaacgaa
tacaatgatcttgctactattttcttcaatacacaggatgatgccataaggaacttgttc
agtgcaaaaacaataaacgagtacagttcccaaagtttgttaacctttttggtcatgttt
tacgctttagcagttgtgacgtttggtactgccgtgcctgctggtcaatttgttcccggt
attatgataggatcaacttatgggcgtcttgtcggcatgtttgttgtaaagtattacaga
aaactcaatattgaagagggaacatatgctttgctaggagctgcatcttttcttggaggt
tcaatgcggatgacagtgtctctatgtgtcattatggttgaaatcacaaataacttgaaa
cttttacctcttattatgctcgttcttcttatatcaaaggctgttggtgatgcttttaat
gatggcatatatgaagaacaagctcgactgagaggcatcccattactagaatcaaagccc
aaatatgagatgcggaatatgatcgcaaaggaggcctgtgggagtggaagggtggtctct
ttccctcgtgttgttaaggtttcagatgtattttccattctgcagagcaacacacacaac
ggttttccagtgattgaacacacaagaagtggagaaccacttgttattggattagtgctt
cggagtcatttattggtcattctgcaatctaaggttgatttccagcatagtcctttaccc
tctgatccaagagcgggaggcaggtcaataaggcatgattctggtgaatttgcaaagcct
gtttctagtaaaggaatatgtcttgacgatatacatctaacatcagaggacttggaaatg
tacatagatcttgccccatttttgaacccctcaccgtatattgtaccggaagatatgtct
ctgacaaaggtatacaatcttttccgccaacttggtttgaggcatttatttgttgttcct
cgtccatcacgtgttgttggcttaataaccagaaaagatttgttaattgaggacgcggaa
aatgtgaatacattagagctccgggcaactagtgtaagaacactgcatcagaataaaaga
ttgacggcaaggaatgcagatgtggagcgcccattgctgaatggacttctgtcttag
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