Trifolium pratense (red clover): 123907902
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Entry
123907902 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123907902
04121 Ubiquitin system [BR:
tpra04121
]
123907902
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123907902
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123907902
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123907902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-C3HC4_3
zf-HC5HC2H
zf-RING_16
zf-HC5HC2H_2
Anti-TRAP
Rad50_zn_hook
DUF1272
Motif
Other DBs
NCBI-GeneID:
123907902
NCBI-ProteinID:
XP_045814315
LinkDB
All DBs
Position
LG2:complement(57754618..57763103)
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AA seq
357 aa
AA seq
DB search
MSSTGGDENPPTVGNSDELRRYFCHQCERTAFISTTSTDLICPNCNGTFLEELETPIPNP
NPNPLPPFFSHTTTDFPAAGFSFPLIFSGAGAANASQPFNDLSALLSSPAPPSPFGEAFN
PVAFIQNYLRNMNAGGGNVQFFINDADDPARQFRFPGNANPGDYFFGPGLEDLIQQLAEN
DPNRRGTPPASKSAVEKLPVIEVTEELLESDSSQCAVCKDTFALGEKAKQMPCKHIYHTD
CILPWLELHNSCPVCRHELPTDDPDYEQRAHGGGGGGAGGGGGGDDSVRTRFRVSLPFMP
FRHVPSSSGAAAGTSNVGNVNNNDSNNSNSGNNNEQSNTENRGNQNFESGTRQEDLD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaccggcggcgacgaaaatcctcctaccgtcggtaactccgatgaacttcgc
cgttacttttgccaccagtgcgaacgcacagctttcatttccactacatccaccgatcta
atctgtcccaattgcaacggtactttcctcgaagaactcgaaactccaatccctaaccct
aatcccaatcctctccctcctttcttctcccacaccacaaccgatttccccgccgcagga
ttctcctttcccctcattttctccggtgccggcgccgccaatgcttctcaaccgttcaat
gatctctccgctttattatcgtctccagcaccgccttcacctttcggtgaagcgtttaac
cctgtcgcgtttattcaaaactacctccgcaacatgaatgccggaggaggcaacgttcag
ttcttcatcaacgatgctgacgatccggcgagacagttccggtttcccggaaacgctaat
ccaggagattatttctttggacctggacttgaggatctgatccagcaattagcagagaac
gatcctaatcggcgagggacaccgccggcgtcgaagtccgctgtggaaaagcttccggtt
attgaagttacggaggagctgctggaatcggattcatcgcagtgcgcggtgtgtaaagac
acatttgcccttggcgaaaaggcaaagcagatgccgtgtaagcatatatatcatactgat
tgtatcttgccgtggttggaattgcataattcgtgtcctgtttgtcgtcatgagttgcct
acagatgatcctgattatgagcagagggctcatggtggtggcggaggcggtgctggtggt
ggaggaggaggagatgattcagtgagaacaaggtttagggtgtctttgccatttatgccg
tttaggcatgtaccttcttcttctggagctgctgcagggacaagtaatgttgggaatgtt
aataacaatgatagcaacaatagcaatagtggaaataataatgagcaatccaataccgaa
aataggggaaatcagaattttgagtcagggactagacaagaagatcttgactga
DBGET
integrated database retrieval system
