Trifolium pratense (red clover): 123908066
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Entry
123908066 CDS
T08949
Name
(RefSeq) zinc finger CCCH domain-containing protein 55-like
Organism
tpra
Trifolium pratense (red clover)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PABC_AtC3H46
RRM_1
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
DNApolII_insertion
RNA_bind
Motif
Other DBs
NCBI-GeneID:
123908066
NCBI-ProteinID:
XP_045814529
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Position
LG2:complement(42128008..42132869)
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AA seq
679 aa
AA seq
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MGSCEATNVVLAKVKNFDPENASKIMGYLLMNLEEYELVRLACCPDHVIHNLAIRVKTHL
GMTLSTPSSPSPLNPIGRIVSSSTNPFSKSSPRGGTNGFDFNRNPPSPSSNVWPPPSFQK
NPISPKFNPLLSFENIQGGGVGVGVGSSSFSPRVNNGDCDFVDEQQLNEYFPFLNEGSNG
DDVVDPRLEMSLGGQNWISGNNGDTHNIHRRSYSANDASFGVEESGLGFGFKPCLYFARG
FCKNGSNCKFVHGDSIDANSAAIVGSPSKFEGLEQHEEFMRFKAAQHQRLVAASQLAAGG
TSPSSYDKYIDFLMQQHNDNQRAAAAAAFMMGEEYYNISGRGRPERNEFLAMVAGDKPNS
ASRQIYLTFPAESTFKDEDVSEYFSKYGPVQDVRIPYQQKRMFGFVTFVFPETVRMILSK
GNPHFICDSRVLVKPYKEKGKVPDKRQHQQQQLERGDFSPCLSPSGFDSKEHFDFHPGAR
MLNNPHDILLRRKMEEQAELQQVLEFQQMRLKSLQLPDFKNNPIYHHQRSFSVGAPLAFP
HQLHSHVNHAGLSSDDIQGDITGYGGSLTSAGSLGAATEQQKEADPSCIDAAAAASENEN
AKGIAKSEGIAKSEAVDLGTRNVEQTLPDSLFASPTKAAGDYQSDFSPQEELNESTAVST
SSSQKFESTTASGDNMASL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttgtgaagcaacaaatgtagttcttgctaaagtcaaaaactttgaccctgaa
aatgcttcaaaaatcatgggttatcttctgatgaatcttgaagaatatgaattagtacgt
ttagcatgttgtcctgaccatgttattcataatcttgctattagggtcaaaacccatttg
ggtatgacactttctaccccttcatctccttctcctcttaacccaattggtagaattgtt
tcttcttctacaaacccattttcaaaatcttctcctagaggtggtactaatggttttgac
ttcaataggaaccctccttcaccttcttccaatgtttggccaccaccctcttttcaaaag
aatccaattagtccaaagtttaaccctttactctcttttgagaatatccaaggtggtggt
gttggtgttggtgttggttctagttctttctcaccaagggttaataatggtgattgtgat
tttgttgatgagcaacagttgaatgagtattttccttttcttaatgaggggtctaacggc
gacgatgtggtcgatccgcgtcttgaaatgagtcttggtggtcagaattggatctctggt
aacaatggtgatactcataatattcacaggaggagttattctgcaaatgatgctagtttt
ggtgttgaagaaagtggactaggatttggttttaaaccatgtctttactttgctagaggg
ttttgtaaaaatggttctaattgcaagtttgttcatggtgattcaattgatgctaattct
gctgctattgttggttcaccctctaagtttgagggattggaacagcatgaagagttcatg
aggtttaaggctgctcagcatcaaagattggttgctgcatcacaacttgctgctggtgga
acatcgccgtcttcgtacgacaagtacattgactttctgatgcagcagcacaatgataac
caaagagctgcggctgcagcagcgtttatgatgggtgaagaatattacaacattagtgga
cgcggcaggcccgaaaggaacgagtttcttgctatggttgctggtgataagccaaactcc
gcttcgcgacagatttatttaacctttcctgctgaaagcacattcaaagatgaagatgtt
tcggagtactttagcaaatatggacctgtccaagatgtgagaattccttaccagcaaaag
cgtatgttcggttttgttacctttgtctttcctgagacagtgagaatgatattatcgaaa
gggaatcctcattttatatgtgattcacgcgtgcttgtgaaaccctacaaggagaaggga
aaagttcctgacaagagacaacatcaacaacagcaattagagaggggagatttttcacca
tgtttaagtccctccggatttgactctaaagaacattttgatttccatcccggagcaaga
atgttgaacaatccgcatgatatcttattgagaagaaaaatggaggagcaggctgagttg
cagcaagtccttgaattccaacaaatgaggctgaagagtctgcagcttccagatttcaag
aataatccgatttaccaccaccagcgcagtttctctgttggggctcctttggcttttccg
catcaacttcatagccatgttaaccatgcaggtctttcttctgatgacattcaaggggac
attacaggctatggtggcagcctcacttctgctggttcgttaggtgctgcaactgagcag
cagaaagaagctgatccatcttgtattgatgctgctgctgctgcttctgagaatgagaat
gcaaagggtattgcaaagtctgagggtattgcaaagtctgaggccgtagatcttggcact
agaaatgtggagcaaacccttcctgacagtctgtttgcttcaccaacaaaagccgccgga
gattatcagtctgatttctctccacaggaagagctcaatgagagtactgcagtttcaact
agctcatctcagaagtttgaatcgacaactgcttcgggtgataacatggcctccctttaa
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