Trifolium pratense (red clover): 123908120
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Entry
123908120 CDS
T08949
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123908120
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123908120
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123908120
03036 Chromosome and associated proteins [BR:
tpra03036
]
123908120
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123908120
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123908120
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123908120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
123908120
NCBI-ProteinID:
XP_045814612
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Position
LG2:7376065..7382505
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AA seq
550 aa
AA seq
DB search
MIKQILGKIPRKPSKSSHSDSNGNGGLVNGGSGSSLNSSYGSSNGTLKSNSASSSKSLSS
GSGELYSGNGSSAPLSANSSKTNQAKKSAPVIGSQVSLIMAHGNGVYEALPGFRDVSSSE
KPNLFIRKLNMCCVVFDFNDPAKHLKEKDIKRQTLLELVDYISSVNSKFNEATMQEITKM
VAANLFRTLPCSNHDGKFAEAYDPEEEEPALEPAWSHLQIVYEVLYRFVSSSETDAKLAK
RYIDHSFVLRLLDLFDSEDQREREYLKTILHRIYGKFMVHRPYIRKAINNIFYQFIFETE
KHNGIAELLEILGSIINGFALPLKEEHKLFLTRALIPLHKPKCVSMYHQQLSYCITQFVE
KDVRLADTVIRGLLKYWPVTNSGKEVMFLGELEEVLEATQVFEFQKCAVGLFRQIARCLT
SLHFQVAERALFLWNNDHIRNLIIQNCKVILPIIFPALEKNARGHWNLAVQSLTLNVRKI
FSEADQTLFDECMIKFQEDESKEREKQEKRESSWKKLEDVAIASASISNEAVLASRFASS
LAVATVQSNY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcagatacttggtaaaataccgcggaagccttcaaaatcatcgcatagtgat
tcgaacggtaatggagggttggtcaatggtggttctggttcatcattgaattcatcttat
ggtagttccaatggtactttgaaatctaattcagcttcttcttcaaaatctttaagttct
ggttcgggtgagttgtattctgggaatgggagttctgcaccgctgtcagcaaattcgagt
aaaacaaaccaagctaagaagtcagctcctgtgattggatcccaagttagtttgataatg
gctcatggtaatggtgtttacgaggctttgccgggttttcgagatgtttctagctcagaa
aagcctaatctttttataaggaagttaaatatgtgttgtgttgtatttgattttaatgat
cctgccaagcatcttaaagagaaggatatcaagaggcaaacattgcttgagcttgttgat
tatatttcatctgttaattcaaagttcaatgaagcgacgatgcaggagatcaccaagatg
gtggcggcaaatttatttcgaactctaccatgttcgaatcatgatggtaagtttgcagaa
gcatatgatcctgaggaagaggagcctgcgttggaacctgcgtggagtcatctgcagatt
gtgtatgaagttctctacaggtttgtgtcttcatcagagacggatgcaaagcttgctaaa
cgatacattgatcattcatttgtattgagactgctcgacctctttgactctgaggaccaa
agagaaagggaatatttgaagactattctccaccgtatttatgggaagttcatggtacat
cggccgtacattagaaaagctatcaataacatcttttatcagttcatatttgagacagaa
aaacacaatggaattgcagaattgctggagattttgggcagtataattaatggatttgct
ttgcctttaaaggaagagcataagctgttccttacccgtgcattgatcccacttcacaag
ccgaagtgtgtctcaatgtatcatcaacaactttcgtactgcattacgcagtttgttgag
aaagatgtccggttagctgatactgtgattagaggccttttgaaatactggcctgtaact
aatagtggaaaggaggtaatgttccttggtgaactagaagaagttttagaagccactcaa
gtatttgaatttcagaaatgtgcagtgggattgtttcgtcaaattgctagatgcctcacc
agcctacactttcaggtagctgaaagggcactgtttctttggaacaacgatcatattaga
aatttgataattcaaaattgcaaagtaatactacctataatcttccctgcattggagaaa
aacgcacgaggtcactggaacctagctgttcagagtttgactctgaatgtgaggaaaata
ttctcggaggctgatcagacactttttgatgaatgcatgatcaaattccaggaagatgaa
agcaaggaacgagagaagcaagagaagcgggagtcctcgtggaagaaattggaagatgtg
gctattgcatctgcatctataagcaatgaagcagttcttgcctcaaggttcgcttcctcc
ctcgctgttgctacggtacaaagcaactattaa
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