Trifolium pratense (red clover): 123908164
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Entry
123908164 CDS
T08949
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03440
Homologous recombination
tpra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123908164
03460 Fanconi anemia pathway
123908164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123908164
03036 Chromosome and associated proteins [BR:
tpra03036
]
123908164
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123908164
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123908164
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
123908164
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
123908164
FA (Fanconi anemia) pathway
Downstream FA components
123908164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
123908164
NCBI-ProteinID:
XP_045814666
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All DBs
Position
LG2:50303839..50311593
Genome browser
AA seq
1212 aa
AA seq
DB search
MSTWQLFSDADNNYRWQINSDDTSNLIKPPTPPIPTSTLPSMYNLLLHASTSHLFQPQDD
ENAMDDSFGFSNSLFKTASGRKVTISPNGIVRAKTLLGLGLNDEIVSSDIQTPLSAKKFN
GFDEELPRLKVIDSCKKSSSVSFQSPLVSRLRNGFEDKIVQPDSACSSVKQAPVKFQSVV
SDIQTPQNVKKFNVFDEESPHLQSMDSCKTKSVVSFQSPLVGRLKHGFENKIVQPDSGSV
SCAKQVPSKFQTIGHIQTPQNVTKFNAFDEESPHLQLMDSCKATSVVSFQSPLVGRLKNG
FESTSVQPDSGLGGGAKQSSIKFQTAGGRSLSISRDALKRARSLLGDPDLGDFFDGGDSL
FSFPDKRQTNTIISSVERSESNNTQTPLLHQMTPESNHNHMKKSFKYPLQPSKQMEFSNK
LPHEGNGNNLIRKFDDAVNESDCGRKSSSTPGQKPLYNKNDVVNSTIKSSSLNGFSSRMG
SRGKPLGRALVDISNTTTTINTNNKQPSGGKRRLGLNATVSSFKKPRISNISASGDQVVQ
KFPNDLSQLSSGASGCKRNVSTRYPFRYPRMHIKEFFAVPPLEQKLHFPNQVRQVTSGNA
GKYIFNDGSDDSGTGAEAFVHLLAQHGASLHFASKEWVLNHYKWIVWKLACYERCYPARC
AGKFLTVSNVLEELKYRYEREVNHGHRSTIKKILEGDGLPSSMMTLCISSVHSDHVLESG
TLFEAQTGNQSTEAVKVELTDGWYSINAILDVPLSKQLATGRLFVGQKLRIWGAGLCGWN
GPVSPLEVSSTVSLFLHMNGTYRAHWADRLGFCKVAGPPLAFKCIKSNGGLVPQTLAGIT
RIYPILYKERLSSGRSVVISERMEDKMMELHNQRRSAIVDNIVSEYQKERTGSHIYDYGD
SEGAKIYKMLETAAEPEFLMADMSPEQLNSFAAYKAKLNATRQSQMESSIEKALKDSGLG
NREVTPFMRLRVVGLTYKTRREKPKEGIVTIWNPTQKQRQELVEGEAYAIAGLTPSGSDS
DVLHLQTRGSTTKWLPLSSSAKEQFKPFFSSRKSIPLSSLSDIPLSNEFDIAAFVVHVGE
VYTSNQQKKQWVFVTDGSIMHGLRSEKLMDTLLAICFCSPLIDHDSFPPINYNLAGSTVG
FCNLIKKEKDHTNHVWVADANENSTYYLKFDSLHCSHLQNAASSVTRWASESSLIMEKLK
ENVFDIIGDCKA
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagttattctccgacgccgacaacaattaccggtggcaaatcaactcc
gacgacacttcaaatcttatcaaacctcccactcctcctattcccacctccacccttccc
tctatgtacaatcttctcctacatgcttccacttcacaccttttccaacctcaagatgat
gaaaatgcgatggatgatagttttggattctcgaattcgcttttcaagacagcttctgga
agaaaagttactatttctcctaatggtattgttagagcaaagactttacttggattaggt
ttgaatgatgaaattgtaagtagtgatattcaaacccctcttagtgctaagaaatttaat
ggttttgatgaagaattgccgcgtttaaaggttattgatagttgtaaaaagtcaagttct
gtgtcgtttcaaagtcctttagttagtagattgaggaatggttttgaggataaaattgtg
caaccagatagtgcttgtagcagtgttaagcaagctccagttaaattccaatctgttgtt
agtgatattcaaacccctcagaatgttaaaaagtttaatgtgtttgatgaagaatcacct
catttacagtctatggatagttgcaaaacgaagagtgttgtgtcgtttcaaagtccttta
gttggtagattaaaacacggttttgagaataaaattgtgcaaccagatagtggcagtgtt
agttgtgctaagcaagttccgagtaaattccaaactattggtcatattcaaacccctcag
aatgttacaaaatttaatgcgtttgatgaagaatcacctcatttacagctcatggatagt
tgcaaagcgacaagtgttgtgtcatttcaaagtcctctagttggtcgattaaagaacggt
tttgagagtacaagtgtgcagccagatagtggattaggtggtggtgctaagcagtcttca
atcaaattccaaactgcagggggaaggtcattatccatttcccgtgatgcgctgaaacgc
gctaggagccttcttggtgatcctgatttaggagatttctttgatggaggggattcactt
ttctcgtttccggataagagacaaaccaacacaatcatttcttctgttgaaagaagtgag
agtaataatactcagactcctttgcttcatcaaatgacaccagagagcaatcacaatcac
atgaaaaaaagtttcaaataccctttgcagccttctaaacaaatggaattttcaaataag
cttccccatgaaggcaatgggaataacttaatcaggaaatttgatgatgctgtgaatgaa
agtgactgtggtcgtaaaagtagcagcactcctggacagaaacccttgtataacaaaaat
gatgtggttaactcaacaataaaaagttcttcattgaatggtttttcttcaagaatgggt
tcacgtggaaagcctttgggcagggcattggttgatatttccaacacaactaccacaatt
aatacaaacaataaacaaccttccggtgggaaaaggagactaggattaaatgcaactgtt
tcttccttcaaaaagcctcgcatttccaatatctctgcctctggtgaccaagttgttcaa
aagtttcctaacgatttgtctcaattatcatctggtgcttctggatgcaaaagaaatgtt
tctacccgatacccatttcgatatccaaggatgcacatcaaggaatttttcgcagttcct
ccattagaacaaaaactgcattttcccaaccaagtcagacaggtgacgtcaggtaatgca
ggaaagtacatattcaatgatgggtctgatgatagtggtacgggagcagaagctttcgtc
catctgttggcacagcacggagcttcccttcattttgcttcaaaagagtgggttttgaat
cattacaagtggattgtttggaaactggcatgctatgagagatgctatccagctaggtgc
gctggaaagtttctgactgtatcaaatgtgcttgaggaactgaagtacagatatgaaaga
gaagtgaatcatggccaccggtctaccatcaagaaaattctcgaaggggatggattgcct
tcttcaatgatgactctctgcatatctagcgttcactctgatcatgtacttgaaagtggg
acattatttgaggcacaaaccgggaatcagagcacggaagcagtaaaagttgaactaact
gatggatggtattctataaatgccattttagacgttccattgtcaaagcaactggctact
ggaagattgtttgtaggacaaaagcttcggatctggggagcaggattatgtggctggaat
gggccagtttcaccccttgaggtgtcatcaacagttagtttatttcttcacatgaatgga
acatatagagctcattgggctgatcggttaggattttgtaaagttgctggtccacctttg
gcttttaaatgcataaaaagcaatggcggtttagtacctcaaactttggcaggaattact
cgcatatatcccattctttacaaagaaaggttaagcagtggacgatctgttgtcatatca
gagaggatggaggataaaatgatggagctgcacaatcaaagacgctccgctattgtagat
aacattgtttcggagtatcagaaggaaagaacgggttcacatatttatgattatggcgat
agtgaaggggctaagatttataagatgctggagacagctgcagaacccgaattcctaatg
gcagatatgagtccggagcaacttaattcttttgctgcttataaggccaaattaaatgca
accagacagtcacaaatggaaagttcaattgagaaagctttgaaagattctggcttgggg
aacagagaagtaacgccatttatgaggttacgggtagttggattaacttataaaactcga
cgagagaagcctaaagaaggcatagtaacaatctggaatccaacgcagaagcagcgccag
gagctggtagagggagaagcatatgcaattgcaggactcacaccatcaggctctgattcg
gatgtccttcacttgcagactagaggatctactaccaagtggttgccattatcttctagt
gcaaaggaacagtttaagccatttttcagtagtcggaaatcaatcccattgtcaagtttg
agtgacatccctctttccaatgagttcgatattgctgcatttgttgtgcatgtgggagag
gtttatacatcaaatcagcaaaagaaacaatgggtttttgttactgatggatccatcatg
catggtttacggtcagaaaagttaatggacacgttacttgccatttgcttttgctctcca
ttgattgatcatgattcatttccaccaatcaactataacctcgctggatctacggttggt
ttctgtaatcttataaaaaaggagaaagaccatacaaaccatgtctgggttgctgatgct
aatgaaaactcaacctattatttgaaatttgattccctacactgttctcacctccaaaat
gctgccagctccgtcacaagatgggctagcgaatctagcttgataatggagaaactcaag
gaaaatgtgttcgatataattggtgattgtaaagcatag
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